Matthew N McCall
| Snapshot Date: 2025-04-24 15:01 -0400 (Thu, 24 Apr 2025) |
| git_url: https://git.bioconductor.org/packages/spkTools |
| git_branch: RELEASE_3_21 |
| git_last_commit: 62162ce |
| git_last_commit_date: 2025-04-15 09:44:02 -0400 (Tue, 15 Apr 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-04-28 13:02 -0400 (Mon, 28 Apr 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" | 4832 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.5.0 RC (2025-04-04 r88126 ucrt) -- "How About a Twenty-Six" | 4574 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" | 4558 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.0 RC (2025-04-04 r88129) -- "How About a Twenty-Six" | 4553 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2079/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| spkTools 1.64.0 (landing page) Matthew N McCall
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | ERROR | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | ERROR | |||||||||
|
To the developers/maintainers of the spkTools package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/spkTools.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: spkTools |
| Version: 1.64.0 |
| Command: rm -rf spkTools.buildbin-libdir && mkdir spkTools.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh spkTools_1.64.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R spkTools.buildbin-libdir |
| StartedAt: 2025-04-26 19:23:51 -0400 (Sat, 26 Apr 2025) |
| EndedAt: 2025-04-26 19:23:57 -0400 (Sat, 26 Apr 2025) |
| EllapsedTime: 6.8 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf spkTools.buildbin-libdir && mkdir spkTools.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh spkTools_1.64.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R spkTools.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=spkTools.buildbin-libdir spkTools_1.64.0.tar.gz' >>>>>>> * installing *source* package ‘spkTools’ ... ** this is package ‘spkTools’ version ‘1.64.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spkTools) chown: spkTools.buildbin-libdir/spkTools/R/spkTools: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/R/spkTools.rdx: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/R/spkTools.rdb: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/R: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/vignette.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/data.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/links.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/features.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/nsInfo.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/package.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/hsearch.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta/Rd.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/Meta: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/NAMESPACE: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/html/R.css: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/html/00Index.html: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/html: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/DESCRIPTION: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/INDEX: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/doc/spkDoc.R: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/doc/index.html: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/doc/spkDoc.pdf: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/doc/spkDoc.Rnw: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/doc: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/data/affy.rda: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/data: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/help/AnIndex: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/help/aliases.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/help/spkTools.rdx: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/help/spkTools.rdb: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/help/paths.rds: Operation not permitted chown: spkTools.buildbin-libdir/spkTools/help: Operation not permitted chown: spkTools.buildbin-libdir/spkTools: Operation not permitted