Qian Liu
| Snapshot Date: 2025-04-24 15:01 -0400 (Thu, 24 Apr 2025) |
| git_url: https://git.bioconductor.org/packages/VCFArray |
| git_branch: RELEASE_3_21 |
| git_last_commit: b36ef19 |
| git_last_commit_date: 2025-04-15 11:39:54 -0400 (Tue, 15 Apr 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-04-28 13:02 -0400 (Mon, 28 Apr 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" | 4832 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.5.0 RC (2025-04-04 r88126 ucrt) -- "How About a Twenty-Six" | 4574 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" | 4558 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.0 RC (2025-04-04 r88129) -- "How About a Twenty-Six" | 4553 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2289/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| VCFArray 1.24.0 (landing page) Qian Liu
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | ERROR | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | ERROR | |||||||||
|
To the developers/maintainers of the VCFArray package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/VCFArray.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: VCFArray |
| Version: 1.24.0 |
| Command: rm -rf VCFArray.buildbin-libdir && mkdir VCFArray.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh VCFArray_1.24.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R VCFArray.buildbin-libdir |
| StartedAt: 2025-04-26 19:41:30 -0400 (Sat, 26 Apr 2025) |
| EndedAt: 2025-04-26 19:42:25 -0400 (Sat, 26 Apr 2025) |
| EllapsedTime: 55.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf VCFArray.buildbin-libdir && mkdir VCFArray.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh VCFArray_1.24.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R VCFArray.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=VCFArray.buildbin-libdir VCFArray_1.24.0.tar.gz' >>>>>>> * installing *source* package ‘VCFArray’ ... ** this is package ‘VCFArray’ version ‘1.24.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (VCFArray) chown: VCFArray.buildbin-libdir/VCFArray/R/VCFArray.rdx: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/R/VCFArray.rdb: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/R/VCFArray: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/R: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta/vignette.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta/links.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta/features.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta/nsInfo.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta/package.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta/hsearch.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta/Rd.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/Meta: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/NAMESPACE: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/html/R.css: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/html/00Index.html: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/html: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/DESCRIPTION: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/NEWS: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/INDEX: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/doc/index.html: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/doc/VCFArray.R: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/doc/VCFArray.Rmd: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/doc/VCFArray.html: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/doc: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/help/AnIndex: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/help/VCFArray.rdx: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/help/VCFArray.rdb: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/help/aliases.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/help/paths.rds: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray/help: Operation not permitted chown: VCFArray.buildbin-libdir/VCFArray: Operation not permitted