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This page was generated on 2025-04-22 13:20 -0400 (Tue, 22 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" 4831
palomino7Windows Server 2022 Datacenterx644.5.0 RC (2025-04-04 r88126 ucrt) -- "How About a Twenty-Six" 4573
lconwaymacOS 12.7.1 Montereyx86_644.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" 4599
kjohnson3macOS 13.7.1 Venturaarm644.5.0 RC (2025-04-04 r88126) -- "How About a Twenty-Six" 4553
kunpeng2Linux (openEuler 24.03 LTS)aarch64R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" 4570
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1510/2341HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OSTA.data 1.0.0  (landing page)
Yixing E. Dong
Snapshot Date: 2025-04-21 13:40 -0400 (Mon, 21 Apr 2025)
git_url: https://git.bioconductor.org/packages/OSTA.data
git_branch: RELEASE_3_21
git_last_commit: 6d32e00
git_last_commit_date: 2025-04-15 13:48:14 -0400 (Tue, 15 Apr 2025)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  YES
palomino7Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  YES
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  YES
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    OK    OK  YES
kunpeng2Linux (openEuler 24.03 LTS) / aarch64  OK    ERROR  skipped

BUILD results for OSTA.data on kunpeng2

To the developers/maintainers of the OSTA.data package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OSTA.data.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: OSTA.data
Version: 1.0.0
Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSTA.data
StartedAt: 2025-04-22 03:08:02 -0000 (Tue, 22 Apr 2025)
EndedAt: 2025-04-22 03:09:11 -0000 (Tue, 22 Apr 2025)
EllapsedTime: 69.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data OSTA.data
###
##############################################################################
##############################################################################


* checking for file ‘OSTA.data/DESCRIPTION’ ... OK
* preparing ‘OSTA.data’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘OSTA.data.Rmd’ using rmarkdown

Quitting from OSTA.data.Rmd:94-96 [xen]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! NotImplemented: Support for codec 'zstd' not built
In order to read this file, you will need to reinstall arrow with additional features enabled.
Set one of these environment variables before installing:

 * Sys.setenv(LIBARROW_MINIMAL = "false") (for all optional features, including 'zstd')
 * Sys.setenv(ARROW_WITH_ZSTD = "ON") (for just 'zstd')

See https://arrow.apache.org/docs/r/articles/install.html for details
---
Backtrace:
    ▆
 1. └─SpatialExperimentIO::readXeniumSXE(td)
 2.   ├─base::as.data.frame(read_parquet(metadata_file))
 3.   └─arrow::read_parquet(metadata_file)
 4.     └─base::tryCatch(reader$ReadTable(), error = read_compressed_error)
 5.       └─base (local) tryCatchList(expr, classes, parentenv, handlers)
 6.         └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
 7.           └─value[[3L]](cond)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'OSTA.data.Rmd' failed with diagnostics:
NotImplemented: Support for codec 'zstd' not built
In order to read this file, you will need to reinstall arrow with additional features enabled.
Set one of these environment variables before installing:

 * Sys.setenv(LIBARROW_MINIMAL = "false") (for all optional features, including 'zstd')
 * Sys.setenv(ARROW_WITH_ZSTD = "ON") (for just 'zstd')

See https://arrow.apache.org/docs/r/articles/install.html for details
--- failed re-building ‘OSTA.data.Rmd’

SUMMARY: processing the following file failed:
  ‘OSTA.data.Rmd’

Error: Vignette re-building failed.
Execution halted