Back to Rapid builds (Linux only) of a subset of BioC 3.21
Report updated every 6 hours

This page was generated on 2025-04-08 12:34 -0400 (Tue, 08 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 134/217HostnameOS / ArchINSTALLBUILDCHECK
metagenomeSeq 1.49.1  (landing page)
Joseph N. Paulson
Snapshot Date: 2025-04-08 12:00 -0400 (Tue, 08 Apr 2025)
git_url: https://git.bioconductor.org/packages/metagenomeSeq
git_branch: devel
git_last_commit: 96adc06
git_last_commit_date: 2024-12-18 01:49:01 -0400 (Wed, 18 Dec 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for metagenomeSeq on teran2

To the developers/maintainers of the metagenomeSeq package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: metagenomeSeq
Version: 1.49.1
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data metagenomeSeq
StartedAt: 2025-04-08 12:17:53 -0400 (Tue, 08 Apr 2025)
EndedAt: 2025-04-08 12:17:54 -0400 (Tue, 08 Apr 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data metagenomeSeq
###
##############################################################################
##############################################################################


* checking for file ‘metagenomeSeq/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/filterData.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitDO.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitFeatureModel.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitFeatureModelResults-class.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitLogNormal.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitMultipleTimeSeries.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitPA.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitSSTimeSeries.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitTimeSeries.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitZeroLogNormal.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitZig.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/fitZigResults-class.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/getCountDensity.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/getEpsilon.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/getNegativeLogLikelihoods.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/getPi.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/getZ.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/isItStillActive.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/libSize-set.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/libSize.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/loadBiom.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/loadMeta.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/loadMetaQ.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/loadPhenoData.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/lungData.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/makeLabels.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/mergeMRexperiments.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/mergeTable.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/metagenomeSeq-deprecated.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/metagenomeSeq-package.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/mouseData.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/newMRexperiment.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/normFactors-set.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/normFactors.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotBubble.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotClassTimeSeries.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotCorr.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotFeature.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotGenus.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotMRheatmap.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotOTU.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotOrd.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotRare.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/plotTimeSeries.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/posteriorProbs.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/returnAppropriateObj.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/ssFit.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/ssIntervalCandidate.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/ssPerm.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/ssPermAnalysis.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/trapz.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/ts2MRexperiment.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/uniqueFeatures.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/wrenchNorm.Rd': No space left on device
cp: error writing '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/man/zigControl.Rd': No space left on device
cp: cannot create directory '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/tests': No space left on device
cp: cannot create directory '/tmp/RtmpPIAdxi/Rbuild94b4069886c74/metagenomeSeq/vignettes': No space left on device
 ERROR
copying to build directory failed