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BioC 3.2: BUILD BIN report for SGSeq on moscato1

This page was generated on 2015-08-20 13:23:27 -0700 (Thu, 20 Aug 2015).

Package 934/1069HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SGSeq 1.3.16
Leonard Goldstein
Snapshot Date: 2015-08-19 16:24:33 -0700 (Wed, 19 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/SGSeq
Last Changed Rev: 107564 / Revision: 107602
Last Changed Date: 2015-08-18 16:35:06 -0700 (Tue, 18 Aug 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK YES, new version is higher than in internal repository
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK [ OK ]YES, new version is higher than in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK YES, new version is higher than in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK YES, new version is higher than in internal repository

Summary

Package: SGSeq
Version: 1.3.16
Command: cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.3.16.zip . & cd ../..
StartedAt: 2015-08-20 12:37:11 -0700 (Thu, 20 Aug 2015)
EndedAt: 2015-08-20 12:37:28 -0700 (Thu, 20 Aug 2015)
EllapsedTime: 16.5 seconds
RetCode: 0
Status:  OK  
PackageFile: SGSeq_1.3.16.zip
PackageFileSize: 2.342 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.3.16.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: data/ (256 bytes security) (stored 0%)
  adding: data/Rdata.rdb (188 bytes security) (deflated 27%)
  adding: data/Rdata.rds (188 bytes security) (stored 0%)
  adding: data/Rdata.rdx (188 bytes security) (stored 0%)
  adding: DESCRIPTION (188 bytes security) (deflated 39%)
  adding: doc/ (256 bytes security) (stored 0%)
  adding: doc/index.html (188 bytes security) (deflated 56%)
  adding: doc/SGSeq.pdf (188 bytes security) (deflated 13%)
  adding: doc/SGSeq.Rnw (188 bytes security) (deflated 66%)
  adding: extdata/ (256 bytes security) (stored 0%)
  adding: extdata/bams/ (256 bytes security) (stored 0%)
  adding: extdata/bams/N1.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N1.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/N2.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N2.bam.bai (188 bytes security) (deflated 100%)
  adding: extdata/bams/N3.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N3.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/N4.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/N4.bam.bai (188 bytes security) (deflated 100%)
  adding: extdata/bams/T1.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T1.bam.bai (188 bytes security) (deflated 100%)
  adding: extdata/bams/T2.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T2.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/T3.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T3.bam.bai (188 bytes security) (deflated 99%)
  adding: extdata/bams/T4.bam (188 bytes security) (deflated 0%)
  adding: extdata/bams/T4.bam.bai (188 bytes security) (deflated 100%)
  adding: help/ (256 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 84%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: help/SGSeq.rdb (188 bytes security) (deflated 3%)
  adding: help/SGSeq.rdx (188 bytes security) (stored 0%)
  adding: html/ (256 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 90%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 71%)
  adding: MD5 (188 bytes security) (deflated 50%)
  adding: Meta/ (256 bytes security) (stored 0%)
  adding: Meta/data.rds (188 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 63%)
  adding: NEWS (188 bytes security) (deflated 50%)
  adding: R/ (256 bytes security) (stored 0%)
  adding: R/SGSeq (188 bytes security) (deflated 41%)
  adding: R/SGSeq.rdb (188 bytes security) (deflated 21%)
  adding: R/SGSeq.rdx (188 bytes security) (deflated 1%)
  adding: scripts/ (256 bytes security) (stored 0%)
  adding: scripts/createExampleData.R (188 bytes security) (deflated 66%)
  adding: unitTests/ (256 bytes security) (stored 0%)
  adding: unitTests/test_analyzeFeatures.R (188 bytes security) (deflated 31%)
  adding: unitTests/test_analyzeVariants.R (188 bytes security) (deflated 21%)
  adding: unitTests/test_annotate.R (188 bytes security) (deflated 49%)
  adding: unitTests/test_classes.R (188 bytes security) (deflated 71%)
  adding: unitTests/test_convertToSGFeatures.R (188 bytes security) (deflated 25%)
  adding: unitTests/test_convertToTxFeatures.R (188 bytes security) (deflated 43%)
  adding: unitTests/test_findSGVariants.R (188 bytes security) (deflated 24%)
  adding: unitTests/test_getSGFeatureCounts.R (188 bytes security) (deflated 33%)
  adding: unitTests/test_getSGVariantCounts.R (188 bytes security) (deflated 58%)
  adding: unitTests/test_mergeTxFeatures.R (188 bytes security) (deflated 36%)
  adding: unitTests/test_predictTxFeatures.R (188 bytes security) (deflated 30%)