GlobalAncova 3.37.0 Manuela Hummel
Snapshot Date: 2015-08-19 16:24:33 -0700 (Wed, 19 Aug 2015) | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GlobalAncova | Last Changed Rev: 102594 / Revision: 107602 | Last Changed Date: 2015-04-16 13:02:44 -0700 (Thu, 16 Apr 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | ERROR | skipped | | |
moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | [ ERROR ] | skipped | skipped | |
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | ERROR | skipped | skipped | |
oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | ERROR | skipped | skipped | |
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### Running command:
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### chmod a+r GlobalAncova -R && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data GlobalAncova
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* checking for file 'GlobalAncova/DESCRIPTION' ... OK
* preparing 'GlobalAncova':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ...Warning: running command '"D:/biocbld/bbs-3.2-bioc/R/bin/x64/Rscript" --vanilla --default-packages= -e "tools::buildVignettes(dir = '.', tangle = TRUE)"' had status 1
ERROR
Loading required package: corpcor
Loading required package: globaltest
Loading required package: survival
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following object is masked from 'package:globaltest':
sort
The following objects are masked from 'package:stats':
IQR, mad, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, as.vector, cbind, colnames, do.call, duplicated,
eval, evalq, get, grep, grepl, intersect, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rep.int, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unlist, unsplit
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: IRanges
Loading required package: S4Vectors
Loading required package: org.Hs.eg.db
Loading required package: DBI
Loading required package: Rgraphviz
Loading required package: graph
Loading required package: grid
Loading required package: annotate
Loading required package: XML
Attaching package: 'XML'
The following object is masked from 'package:graph':
addNode
Attaching package: 'annotate'
The following object is masked from 'package:Rgraphviz':
toFile
Loading required package: KEGG.db
KEGG.db contains mappings based on older data because the
original resource was removed from the the public domain
before the most recent update was produced. This package
should now be considered deprecated and future versions of
Bioconductor may not have it available. Users who want more
current data are encouraged to look at the KEGGREST or
reactome.db packages
Warning: running command '"C:\PROGRA˜2\MIKTEX˜1.9\miktex\bin\texi2dvi.exe" --quiet --pdf "GlobalAncova.tex" --max-iterations=20 -I "D:/biocbld/bbs-3.2-bioc/R/share/texmf/tex/latex" -I "D:/biocbld/bbs-3.2-bioc/R/share/texmf/bibtex/bst"' had status 1
Error: running 'texi2dvi' on 'GlobalAncova.tex' failed
LaTeX errors:
s/GlobalAncova.tex:988: ==> Fatal error occurred, no output PDF file produced!
Execution halted