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BioC 3.2: BUILD BIN report for minfi on oaxaca

This page was generated on 2015-08-24 10:56:52 -0700 (Mon, 24 Aug 2015).

Package 625/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
minfi 1.15.11
Kasper Daniel Hansen
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/minfi
Last Changed Rev: 106951 / Revision: 107696
Last Changed Date: 2015-07-31 08:51:31 -0700 (Fri, 31 Jul 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: minfi
Version: 1.15.11
Command: rm -rf minfi.buildbin-libdir && mkdir minfi.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh minfi_1.15.11.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R minfi.buildbin-libdir
StartedAt: 2015-08-24 05:19:02 -0700 (Mon, 24 Aug 2015)
EndedAt: 2015-08-24 05:19:29 -0700 (Mon, 24 Aug 2015)
EllapsedTime: 27.4 seconds
RetCode: 0
Status:  OK 
PackageFile: minfi_1.15.11.tgz
PackageFileSize: 659.3 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf minfi.buildbin-libdir && mkdir minfi.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh minfi_1.15.11.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R minfi.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=minfi.buildbin-libdir minfi_1.15.11.tar.gz'
>>>>>>> 

* installing *source* package ‘minfi’ ...
** R
** inst
** preparing package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : error in rgl_init
** help
Warning: /private/tmp/RtmpCT4bHq/R.INSTALL166483ec91086/minfi/man/mdsPlot.Rd:68: unexpected END_OF_INPUT '}
'
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : error in rgl_init
* DONE (minfi)