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BioC 3.2: BUILD BIN report for ChAMP on perceval

This page was generated on 2015-08-24 10:53:32 -0700 (Mon, 24 Aug 2015).

Package 156/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChAMP 1.7.0
Tiffany Morris
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ChAMP
Last Changed Rev: 103534 / Revision: 107696
Last Changed Date: 2015-05-07 07:55:02 -0700 (Thu, 07 May 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: ChAMP
Version: 1.7.0
Command: rm -rf ChAMP.buildbin-libdir && mkdir ChAMP.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ChAMP_1.7.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ChAMP.buildbin-libdir
StartedAt: 2015-08-24 06:42:38 -0700 (Mon, 24 Aug 2015)
EndedAt: 2015-08-24 06:43:20 -0700 (Mon, 24 Aug 2015)
EllapsedTime: 41.9 seconds
RetCode: 0
Status:  OK 
PackageFile: ChAMP_1.7.0.tgz
PackageFileSize: 3.32 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf ChAMP.buildbin-libdir && mkdir ChAMP.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ChAMP_1.7.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ChAMP.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ChAMP.buildbin-libdir ChAMP_1.7.0.tar.gz'
>>>>>>> 

* installing *source* package ‘ChAMP’ ...
** R
** inst
** preparing package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : error in rgl_init
Warning: replacing previous import by ‘RPMM::ebayes’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::desc’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::colnames’ when loading ‘ChAMP’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : error in rgl_init
Warning: replacing previous import by ‘RPMM::ebayes’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::desc’ when loading ‘ChAMP’
Warning: replacing previous import by ‘IRanges::colnames’ when loading ‘ChAMP’
* DONE (ChAMP)