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BioC 3.2: CHECK report for AgiMicroRna on oaxaca

This page was generated on 2015-08-24 10:56:08 -0700 (Mon, 24 Aug 2015).

Package 33/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AgiMicroRna 2.19.0
Pedro Lopez-Romero
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/AgiMicroRna
Last Changed Rev: 102594 / Revision: 107696
Last Changed Date: 2015-04-16 13:02:44 -0700 (Thu, 16 Apr 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK [ ERROR ] OK 

Summary

Package: AgiMicroRna
Version: 2.19.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings AgiMicroRna_2.19.0.tar.gz
StartedAt: 2015-08-23 21:35:36 -0700 (Sun, 23 Aug 2015)
EndedAt: 2015-08-23 21:35:38 -0700 (Sun, 23 Aug 2015)
EllapsedTime: 2.1 seconds
RetCode: 1
Status:  ERROR 
CheckDir: AgiMicroRna.Rcheck
Warnings: NA

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings AgiMicroRna_2.19.0.tar.gz
###
##############################################################################
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* using log directory ‘/Users/biocbuild/bbs-3.2-bioc/meat/AgiMicroRna.Rcheck’
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-apple-darwin13.4.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘AgiMicroRna/DESCRIPTION’ ... OK
* this is package ‘AgiMicroRna’ version ‘2.19.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘codelink’

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/Users/biocbuild/bbs-3.2-bioc/meat/AgiMicroRna.Rcheck/00check.log’
for details.