Package	Download_score
generegulation	26
variants	32
annotation	49
liftOver	251
arrays	38
eQTL	7
sequencing	35
rnaseqGene	140
highthroughputassays	28
proteomics	7
chipseqDB	27
simpleSingleCell	40
methylationArrayAnalysis	131
ExpressionNormalizationWorkflow	29
RnaSeqGeneEdgeRQL	50
RNAseq123	103
cytofWorkflow	66
TCGAWorkflow	52
recountWorkflow	26
EGSEA123	26
testproj	0
rnaseqDTU	42
BiocMetaWorkflow	24
maEndToEnd	62
BgeeCall	2
SingscoreAMLMutations	26
csawUsersGuide	25
CAGEWorkflow	23
fluentGenomics	27
BP4RNAseq	21
ExpHunterSuite	24
GeoMxWorkflows	167
Biobase	8
bookdown	19
deSolve	3
dittodb	0
campsismod	0
evaluate	383
evd	4
epiR	2
webmockr	0
xaringanthemer	1
furrr	3
devtools	7
fork	1
forecast	7
globals	60
hms	27
htmltools	304
ggPMX	0
gamlss.dist	3
interp	10
ipaddress	0
jsTreeR	1
klaR	4
knitr	273
lpSolveAPI	1
MASS	342
multcomp	113
packrat	10
paletteer	12
precommit	1
pdftools	2
partitions	0
pins	6
pkgload	284
prismatic	12
pointblank	1
pmtables	1
randtoolbox	1
Rsmlx	0
R.rsp	0
rclipboard	5
Rdpack	19
rlang	415
rhub	3
s2	25
recipes	40
roxygen2	150
spatialreg	0
tracee	1
profile	0
scales	79
spaMM	1
spam	18
reda	0
terra	28
sparklyr	2
rsconnect	29
statmod	3
tweenr	40
vaultr	1
sensitivity	1
amgen.okta.client	0
genefilter	2
brew	25
AnnotationDbi	14
Matrix	385
blob	31
memoise	8
tidyr	220
DOSE	2
plyr	58
webshot	10
plotly	67
BiocManager	339
RColorBrewer	12
fansi	110
openssl	437
formatR	21
clusterProfiler	3
BiocParallel	5
IRanges	3
Gviz	2
gtable	244
readr	85
msigdbr	1
ggsignif	6
pkgconfig	2
ipred	22
HandTill2001	0
shinyjs	4
bit	141
bit64	123
rngtools	2
doBy	14
units	13
mice	5
singleCellTK	0
cxAnalysis	0
Rgraphviz	1
rpart	49
desc	63
restfulr	3
checkmate	202
codetools	94
highr	172
htmlwidgets	85
AnVIL	0
GLAD	0
BSgenome	3
rematch2	1
future.apply	174
hexbin	16
sfsmisc	3
shinycssloaders	19
h2o	3
lares	1
rpart.plot	1
collections	0
brms	2
Exact	5
dotCall64	19
esquisse	16
conquer	2
gridtext	3
dtw	0
dtwclust	2
languageserver	1
nonmemica	1
lgr	1
NMdata	3
memisc	1
pagedown	2
PKNCA	1
network	2
pkgdepends	9
padr	1
pkgcache	9
smoothHR	0
riskRegression	1
stringdist	6
wk	28
writexl	27
visNetwork	3
Runuran	1
ucminf	7
shinySelect	0
yardstick	11
tfruns	4
gplots	151
RcppAnnoy	20
tidytree	23
remotes	153
sessioninfo	7
spatstat.utils	42
spatstat.geom	44
uwot	128
FNN	154
aplot	40
assertive.properties	2
enrichR	3
circlize	40
shinyalert	19
shape	61
lsa	1
expm	13
survMisc	1
formatters	7
nloptr	63
Markdown	0
GMD	0
rtkore	0
batchelor	1
sjPlot	2
raster	10
imcRtools	0
RobustRankAggreg	0
future.callr	2
qqconf	1
FactoMineR	12
sp	71
clusterprofielr	0
curatedMetagenomicData	0
RPostgres	100
org.Rn.eg.db	1
SparseM	73
polspline	3
BiasedUrn	1
Cubist	1
doRNG	6
bigreadr	1
fracdiff	4
quarto	6
nlmixr2data	0
servr	6
npde	0
timereg	1
proj4	4
rxode2et	1
rvg	2
rngWELL	1
vcr	0
mclogit	0
ks	7
keyring	1
huxtable	4
timechange	170
gWidgets2tcltk	0
GenomicRanges	6
broom.helpers	22
arm	5
cem	0
bbr	1
binr	0
arrow	13
dfidx	1
clinPK	0
cmdstanr	1
dbplyr	207
datamods	17
xfun	410
doMC	2
Epi	3
cubature	2
DT	108
estimability	26
fda	3
flexdashboard	2
dm	1
downlit	117
workflowsets	4
xaringan	1
future	189
googlesheets4	14
forcats	9
ggeffects	3
gtsummary	6
ggdist	6
lambdr	0
latticeExtra	6
lotri	0
lavaan	5
metafor	6
nlme	203
nhanesA	0
performance	14
plm	1
partykit	3
pkgdown	155
plumber	19
paws.common	109
qap	3
parameters	15
RMariaDB	19
rmarkdown	367
shinyWidgets	80
scico	1
spData	14
spacetime	3
systemfit	0
tibble	20
tidyverse	10
targets	10
tidymodels	5
urca	7
viridisLite	36
timeDate	31
tarchetypes	7
scidb	0
tidyselect	284
glue	213
httpuv	271
GOSemSim	2
shinyBS	2
viridis	179
lattice	147
yaml	302
matrixStats	210
lifecycle	93
mime	17
cpp11	268
S4Vectors	7
biomaRt	1
XML	121
cli	364
crayon	216
GenomeInfoDbData	4
GenomeInfoDb	8
isoband	24
lubridate	85
xml2	104
clipr	8
BiocVersion	9
tzdb	30
zoo	26
cowplot	72
biostatUtil	0
lava	37
DRR	0
glmnet	8
PerformanceAnalytics	1
kohonen	1
progress	80
Rd2roxygen	0
crosstalk	63
labeling	62
gdata	34
multtest	1
qvalue	1
sys	144
hwriter	2
Formula	9
weights	3
sandwich	18
pcaExplorer	0
colourpicker	4
credentials	66
jose	2
seqinr	5
shinytest	3
ssh	4
aws.signature	1
MutationalPatterns	0
variancePartition	1
org.Hs.eg.db	3
bsplus	1
usethis	161
car	32
DBItest	1
chron	3
gghighlight	1
irlba	6
learnr	3
ggtext	4
ggridges	25
DescTools	10
lpSolve	13
mets	1
MatrixModels	33
n1qn1	0
latex2exp	1
protolite	1
paws.application.integration	9
rainbow	2
mnormt	4
polyclip	73
officer	17
matrixcalc	1
RSEIS	1
vroom	69
vegawidget	0
statnet.common	2
rsvg	3
scPipe	0
bbmle	3
systemfonts	262
metap	3
leiden	12
pbapply	13
scattermore	5
sctransform	10
goftest	1
deldir	34
sn	2
VAM	1
rjson	64
class	29
textshaping	198
shinyjqui	1
idr	0
VennDiagram	2
GlobalOptions	1
GetoptLong	3
pkgmaker	2
SnowballC	4
ggtree	3
DelayedMatrixStats	2
hdf5r	18
MatrixGenerics	1
lazyeval	1
exactRankTests	1
KEGGREST	3
scatterpie	51
MCPcounter	0
GenomicAlignments	3
mixOmics	1
KernSmooth	73
PhosR	0
rhdf5	2
Homo.sapiens	0
blockcluster	0
SummarizedExperiment	3
distr	1
maptools	6
irr	0
babelmixr2	1
badger	1
AsioHeaders	4
foghorn	0
lhs	6
mapproj	2
nlmixr2	1
RcppGSL	2
reactable	1
Rook	1
MatchIt	4
pmforest	1
assertr	2
slider	10
shinybusy	16
rxode2parse	1
shinyMobile	0
sensobol	1
rxode2ll	1
yaImpute	2
rxode2random	1
tensorflow	4
whisker	10
ordinal	9
sjstats	1
cytolib	1
cluster	81
callr	267
emayili	2
farver	197
caret	28
collapse	1
DBI	327
datawizard	17
clock	23
dendextend	53
cobalt	1
drake	2
dockerfiler	1
dtplyr	9
fields	10
duckdb	5
workflows	4
fontawesome	128
broom	126
ymlthis	0
gert	116
generics	15
ggraph	33
graphlayouts	54
gld	2
httr	63
gmp	9
insight	21
ggdag	1
lbfgs	0
mlr3	3
nleqslv	1
ParamHelpers	1
patchwork	88
modelr	12
quantreg	80
posterior	3
R.cache	1
ps	342
readxl	32
Rcpp	357
palmerpenguins	1
processx	293
rstpm2	1
projpred	1
RApiSerialize	9
qs	11
RCurl	177
paws.compute	94
rgl	5
saemix	0
rticles	1
shiny	300
sass	288
sf	39
TMB	13
tidygraph	28
rvest	164
tune	6
tinytex	377
sm	1
TSP	5
tidyposterior	1
data.table	380
dplyr	91
vctrs	107
renv	110
iterators	6
locfit	99
magrittr	10
ggplot2	317
snow	7
digest	427
commonmark	247
decoupleR	1
utf8	91
ellipsis	5
reticulate	86
flowWorkspaceData	0
babelgene	1
gargle	21
pamr	1
randomForest	41
km.ci	1
dichromat	5
ModelMetrics	1
dimRed	0
kernlab	57
ddalpha	1
e1071	96
nanostringr	0
mclust	15
filelock	37
pheatmap	0
openxlsx	98
xgboost	117
Bioconductor	1
annotate	2
optparse	40
rapportools	1
purrr	81
RcppEigen	153
foreign	56
testthat	288
expss	1
nnet	34
png	27
pingr	18
pool	11
segmented	24
config	9
shinythemes	1
prettyunits	65
promises	289
SBGNview.data	0
seqpac	25
scater	1
ComplexHeatmap	3
distributional	7
Brobdingnag	1
dparser	1
gsDesign	2
fixest	1
igraph	175
lintr	110
bayestestR	13
flexclust	3
ggRandomForests	0
minqa	86
mapbayr	0
JuliaCall	0
iml	1
BBmisc	1
mlr	2
mrgmisc	1
osqp	3
party	92
progressr	43
ragg	240
scam	1
scatterplot3d	3
rstan	5
RefManageR	1
templater	1
vegan	45
webfakes	0
bdsmatrix	6
reldist	1
Rtsne	20
fitdistrplus	27
ica	3
rex	2
maps	13
SeuratObject	26
spatstat.core	3
spatstat.sparse	29
cachem	335
ape	58
benchmarkme	1
dbscan	6
magick	24
RcppHNSW	18
pdist	1
shinyFiles	4
spatial	24
ade4	3
NMF	7
limma	10
BSgenome.Hsapiens.UCSC.hg19	1
motifmatchr	2
robustbase	30
gower	12
inum	2
libcoin	3
Peptides	1
RClickhouse	0
aws.s3	1
shadowtext	42
dittoSeq	1
GeomxTools	0
genefu	0
DESeq2	6
minpack.lm	3
pcaMethods	1
WGCNA	7
Rhdf5lib	2
ggfun	64
org.Mm.eg.db	2
DEoptimR	15
SingleCelLExperiment	0
modeltools	1
rms	4
apcluster	1
fastmap	237
AUCell	1
cubelyr	0
bigD	19
eha	1
DEoptim	0
juicyjuice	0
HDInterval	1
Matching	4
jpeg	11
nlmixr2lib	1
log4r	1
RcppDE	0
mrgvalprep	1
nlmixr2est	1
slickR	0
NMcalc	0
gap	1
gamlss	4
styler	18
rmutil	1
XLConnect	2
msm	3
nanotime	2
tidyvpc	1
survivalROC	1
GPArotation	1
ggbeeswarm	4
modelenv	4
RApiDatetime	1
BiocIO	1
ggstatsplot	3
DelayedArray	4
castor	1
av	1
admiral	2
asciicast	1
blogdown	0
bslib	353
coro	1
covr	5
Cairo	13
csv	1
WeightIt	3
flexsurv	1
flextable	17
emmeans	36
yulab.utils	60
gmm	1
gt	48
corrr	0
gam	3
geepack	8
geometry	1
haven	49
glmmTMB	4
ggforce	39
gtools	27
htmlTable	35
gnm	1
Hmisc	44
golem	11
hardhat	40
gbm	100
JM	0
infer	4
lobstr	2
mlr3measures	2
lme4	102
mrgsolve	1
modeldata	3
NonCompart	1
optmatch	3
parallelly	200
parsnip	7
paradox	2
narray	0
pcaPP	13
randomForestSRC	3
pillar	93
pls	3
RSQLite	181
RPostgreSQL	4
RBesT	1
rbibutils	14
rrcov	18
R.utils	40
RcppCCTZ	1
rsample	11
rversions	7
reprex	72
RcppArmadillo	225
sortable	3
stringr	88
RItools	2
seriation	34
ranger	30
stringi	343
shiny.router	1
splines2	1
svd	2
transformr	0
survival	238
rstudioapi	148
robust	10
V8	99
rols	0
Biostrings	6
brio	171
mgcv	166
shinydashboard	3
heatmaply	5
foreach	6
withr	272
jsonlite	244
BH	207
fs	261
XVector	2
colorspace	170
polynom	2
curl	397
uuid	220
cmprsk	4
ggpubr	10
ggrepel	233
assertthat	1
backports	144
R6	39
prodlim	29
numDeriv	1
CVST	0
ccaPP	0
quadprog	1
diceR	1
questionr	1
doParallel	4
bibtex	2
registry	1
pkgbuild	161
waldo	187
diffobj	3
zip	165
graph	1
glmmADMB	0
INLA	0
IRkernel	1
rprojroot	63
qpdf	3
rmdformats	1
R.methodsS3	6
R.oo	65
BiocGenerics	8
lmtest	4
ExploreModelMatrix	0
base64enc	1
parsedate	3
markdown	89
webdriver	0
later	158
reshape2	3
clue	63
classInt	15
admiral.test	0
ggcorrplot	2
admiraldev	2
crul	121
gee	2
gganimate	1
gitcreds	6
DHARMa	1
ergm	0
hunspell	49
httr2	173
distill	0
labelled	23
mrgda	1
mlr3misc	2
GA	104
ndjson	0
pracma	10
pak	3
RMySQL	5
NMproject	1
reactlog	1
psych	115
gh	141
Rwave	1
tables	2
RSiena	0
jomo	1
Rttf2pt1	1
tseries	8
xts	35
tictoc	11
RSpectra	95
Tplyr	2
mvtnorm	88
Seurat	37
ggplotify	9
rvcheck	4
googledrive	14
svglite	14
mathjaxr	1
plotrix	7
rcmdcheck	3
svMisc	1
spatstat.data	38
TH.data	106
sitmo	2
ClusterR	1
pROC	15
proxy	2
rtracklayer	3
RCircos	0
permute	1
DMRcate	1
edgeR	2
fastmatch	23
reactome.db	2
magic	1
caTools	37
survminer	7
xtable	3
forrester.metadata	0
BiocFileCache	4
treeio	1
carData	2
bitops	143
BSgenome.Hsapiens.UCSC.hg38	2
rstatix	7
listenv	49
ellipse	9
BiocInstaller	1
oligo	1
MOFA2	1
clusterCrit	1
coin	1
dlstats	0
bs4Dash	8
boot	87
mrgvalidate	1
changepoint	24
keras	2
nlmixr2plot	1
Rcsdp	0
RODBC	2
repurrrsive	1
rgeos	4
rxode2	1
PKI	8
RsSimulx	0
xpose	0
dials	9
nlmixr2extra	1
gettz	0
vioplot	1
mc2d	2
mapdata	1
viridislite	0
morpheus	0
ShortRead	1
Rsamtools	2
apexcharter	1
alphashape3d	0
TxDb.Hsapiens.UCSC.hg38.knownGene	1
RcppTOML	10
SNPlocs.Hsapiens.dbSNP151.GRCh38	0
git2r	35
phyclust	0
compositions	2
repr	8
batchtools	1
conflicted	2
simpar	1
GenSA	3
janitor	7
naniar	5
paws	9
ggsci	55
lfe	1
pmxTools	0
sets	1
arules	2
DESeq	0
phyloseq	1
tximportData	0
ggplot	1
Matrix.utils	1
lmom	5
mutoss	1
osmdata	0
flexmix	2
chk	5
influenceR	1
microbenchmark	14
btergm	0
Lahman	1
pec	1
future.batchtools	1
rstanarm	1
rintrojs	3
ShinyItemAnalysis	0
admisc	7
cba	1
DiagrammeR	2
cdip.datastore	1
spatstat.explore	41
mirt	1
httptest	2
HTqPCR	0
GenomicTools	0
pryr	1
pscl	2
glmGamPoi	1
StanHeaders	9
M3Drop	0
TCGAbiolinks	0
ALDEx2	1
alkahest.generic	0
rsvd	2
gprofiler2	3
gridExtra	1
miniUI	1
rAccess	1
lwgeom	4
aws	1
symphony	1
RcppThread	3
RevGadgets	0
setRNG	1
RcppDate	1
tsne	1
entropy	1
lsei	1
infotheo	1
sendmailR	1
phytools	4
zlibbioc	4
DropletUtils	2
praise	1
seqLogo	0
argusDS.trading.performance	1
LDlinkR	0
visR	1
argusDS.backtesting.engine	2
DataOmnio	0
siscreener	0
workflowr	1
EnsDb.Hsapiens.v75	0
imputeLCMD	0
cyclocomp	5
ggnetwork	1
spectacles	0
rugarch	2
bizdays	2
nat.util	0
webshot2	2
Hoover	1
this.path	1
argusDS.gamlss.utils	2
snakecase	10
crossmatch	1
themis	0
ScDblFinder	0
argusDS.shiny.utils	1
pbdZMQ	2
goshawk	1
argusDS.spread.trading.utils	2
base64	4
argusDS.model.tools	3
geojson	1
ATACseqQC	1
SCP	1
rworldmap	1
IAPWS95	0
pander	3
RcppSimdJson	35
preAnomalyDetectionCredLife	1
rMVP	2
fabletools	4
anticlust	0
compareGroups	0
directlabels	1
SIAMCAT	0
RcppProgress	1
akima	1
ash	0
assertive.types	2
tern	4
EValue	3
rhandsontable	3
tmle	3
teal.modules.clinical	1
designmatch	1
gridSVG	1
gmailr	2
BSgenome.Drerio.UCSC.danRer11	0
emdbook	1
geohashTools	0
audio	1
beadarray	0
scRNAseq	0
treemap	1
pbmcref.SeuratData	1
quantable	0
plotROC	1
qrcode	0
ggExtra	3
diptest	3
celda	0
ArrayExpress	1
sodium	4
waffle	1
RgoogleMaps	0
wrapr	1
deepregression	0
smooth	0
PEMM	1
mlr3pipelines	1
graphql	1
RNOmni	0
trackViewer	0
argusDS.modeldb	1
ewfutils	0
gaston	1
vcfR	1
grImport	1
heplots	1
startup	1
orca	1
vipor	16
ICS	0
ABAData	1
coda.base	0
gittargets	1
whereami	0
shiny.react	6
DoseFinding	1
orientlib	0
mzR	1
IlluminaHumanMethylation450kanno.ilmn12.hg19	0
condiments	0
FD	0
english	0
biovizBase	1
scLinear	0
diffloop	0
ALL	1
mlr3tuning	1
Dose	0
org.Dr.eg.db	1
ClinicalQc	0
gupio	1
dynfeature	0
dynwrap	0
babelwhale	0
backbone	0
sjlabelled	1
tximport	1
Rvcg	0
SeqArray	0
dreamerr	0
Ckmeans.1d.dp	0
decor	0
fmtr	2
nonmem2rx	1
PEIP	1
RPMG	1
mlflow	1
sommer	2
LoomExperiment	0
KEGG.db	1
webchem	1
eulerr	1
gap.datasets	0
NNLM	0
Swiffer	1
emdist	0
m03modeldevelopment	0
drat	1
BrowserViz	0
remaCor	2
iatlas.app	0
proxyC	2
REddyProc	0
signal	1
neonUtilities	1
capsidr	0
coxphf	1
nephro	0
inlinedocs	0
Gmisc	0
ggimage	1
BIGL	0
argusDS.FZ.utils	1
networkDynamic	0
ijtiff	0
COSG	0
MsCoreUtils	1
BiocCheck	1
DirichletMultinomial	1
tximeta	1
msdata	0
fastshap	1
C50	0
AnnotationFilter	1
scviewer	0
kmed	0
rnaseqdtu	0
simplesinglecell	0
tcgaworkflow	1
bp4rnaseq	0
csawusersguide	0
egsea123	0
fluentgenomics	0
HardyWeinberg	0
glca	0
BSgenome.Mmul10.SIVmac251	0
khroma	2
logistf	1
Biogenerics	0
qualpalr	0
webp	1
gWidgetstcltk	0
tidyseurat	1
ECOSolveR	1
fGarch	9
argusDS.PossibilityCurves.db.utils	3
ggstats	16
lbfgsb3c	1
palr	1
qwraps2	1
ThresholdROC	0
distances	1
fenr	0
tradeSeq	1
mixsqp	2
sunburstR	0
flowAI	0
shinyMethyl	0
vdbR	0
SomaVarDB	0
NormalizerDE	0
colortools	0
polycor	0
mimosa	0
did	0
moleculaR	0
MetaboReport	0
Rhtslib	2
blastula	0
clustermq	3
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SDMTools	1
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citril.metadata	1
ggkegg	1
cicerone	1
mmrbws	1
microViz	1
Seraut	1
colorSpec	1
tidygate	1
selenider	1
org.Ssalar.eg.db	1
orcutt	1
MATRIX	1
PCDSpline	1
AlphaSimR	1
QGDA	1
leafgl	1
dipsaus	1
aggregateBioVar	1
RPresto	1
ympes	1
standby	1
lmodel2	1
DR.SC	1
flowUtils	1
Boruta	1
EmbedSOM	1
minty	1
teal.builder.checks	1
iotools	1
SFSI	1
minimal	1
EntropyEstimation	1
paran	1
ProfilerAPI2	1
RxODE	1
qctools	1
EpiDISH	1
rtables.officer	1
revgeo	1
CePa	1
conflrhlx	1
bonemarrowref.SeuratData	1
uwo	1
rsq	1
ggvis	1
DAISIEprep	1
PhViD	1
shiny.worker	1
MATRIXS	1
TreeTools	1
tinkr	1
pedigree	1
argusDS.studio.visualisations	1
Rlabkey	1
GreyListChIP	1
tree	1
spec	1
ChronosDSTools	1
ondisc	1
s3	1
emoji	1
AAVess	1
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R6P	1
entropart	1
DWSClient	1
pneumotypr	1
GOsummaries	1
CodeDepends	1
qs2	1
EnvDataQC	1
magittr	1
plotthis	1
duckplyr	1
downloader	1
depmapSLr	1
vtable	1
koalaNetworkDriveData	1
Andromeda	1
bibliometrix	1
quanteda.textstats	1
fastmat	1
switchstep	1
MAI	1
mrds	1
legocolors	1
rtfmt	1
readat	1
cpp11bigwig	1
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