Package Download_score bovineprobe 48 htmg430aprobe 47 TxDb.Celegans.UCSC.ce6.ensGene 261 BSgenome.Osativa.MSU.MSU7 89 porcine.db 51 hgug4845a.db 37 chickenprobe 44 BSgenome.Scerevisiae.UCSC.sacCer2 211 FDb.InfiniumMethylation.hg19 1394 rgu34a.db 59 FDb.FANTOM4.promoters.hg19 35 hgu133a2.db 220 human650v3aCrlmm 34 mpedbarray.db 55 pd.bovgene.1.0.st 39 maizecdf 39 mgug4104a.db 49 hgu133plus2cdf 739 pd.vitis.vinifera 39 anopheles.db0 64 rtu34cdf 40 hguatlas13k.db 54 pd.moex.1.0.st.v1 58 drosgenome1probe 41 hu6800probe 45 pd.2006.07.18.hg18.refseq.promoter 41 hthgu133afrmavecs 26 SNPlocs.Hsapiens.dbSNP.20101109 39 celeganscdf 43 hu35ksubc.db 53 pd.medicago 37 plasmodiumanophelescdf 51 hom.Hs.inp.db 45 SNPlocs.Hsapiens.dbSNP.20111119 32 mgu74ccdf 40 BSgenome.Scerevisiae.UCSC.sacCer3 151 Mu22v3.db 52 BSgenome.Hsapiens.UCSC.hg17 57 mgu74a.db 54 moe430a.db 62 rae230bcdf 42 RmiR.Hs.miRNA 47 mogene20sttranscriptcluster.db 58 hom.Sc.inp.db 34 pd.mirna.3.1 34 pd.bovgene.1.1.st 76 mgu74bv2.db 52 rae230a.db 96 BSgenome.Btaurus.UCSC.bosTau3 54 pd.mogene.2.1.st 49 org.Xl.eg.db 296 ye6100subccdf 39 hom.At.inp.db 29 hthgu133acdf 52 gahgu95av2.db 26 pd.mapping50k.xba240 173 pd.aragene.1.1.st 43 OperonHumanV3.db 52 mirna102xgaincdf 35 xtropicalisprobe 41 ye6100subbcdf 39 rhesusprobe 42 pd.cangene.1.0.st 40 pd.u133.x3p 47 hgu95c.db 55 hgu219probe 37 human1mv1cCrlmm 33 ragene10stprobeset.db 51 org.Sc.sgd.db 572 RnAgilentDesign028282.db 53 pd.tomato 39 BSgenome.Drerio.UCSC.danRer7 246 pd.canine.2 39 pd.hugene.1.1.st.v1 91 pd.mapping50k.hind240 167 ath1121501cdf 65 mu19ksubacdf 39 lumiMouseAll.db 48 h10kcod.db 47 ecolicdf 61 mouse4302frmavecs 52 ye6100subdcdf 40 pd.porgene.1.1.st 41 pd.hg.u133a 84 pd.ragene.1.0.st.v1 60 org.Sco.eg.db 27 SIFT.Hsapiens.dbSNP132 78 pd.e.coli.2 42 pd.hugene.1.0.st.v1 240 hgu133atagprobe 57 hom.Ce.inp.db 31 RmiR.hsa 42 paeg1acdf 39 BSgenome.Gaculeatus.UCSC.gasAcu1 42 hgu95cprobe 44 pd.hg.u95av2 81 drosgenome1cdf 41 agprobe 43 pd.ovigene.1.0.st 38 pd.hg.u95e 42 xlaevis2probe 36 human.db0 117 mouse430a2cdf 49 pd.porgene.1.0.st 40 hgu95b.db 56 hgu219cdf 71 mgu74bv2probe 40 barley1cdf 44 gahgu133bcdf 22 illuminaMousev2.db 64 pd.chicken 37 u133aaofav2cdf 44 rtu34probe 44 hu35ksubccdf 40 BSgenome.Athaliana.TAIR.TAIR9 88 TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts 105 gahgu133bprobe 27 gahgu133aprobe 28 mogene10stprobeset.db 58 BSgenome.Tgondii.ToxoDB.7.0 49 pd.hg.u133a.2 54 hgu133afrmavecs 55 IlluminaHumanMethylation27k.db 52 pd.zebgene.1.0.st 36 targetscan.Hs.eg.db 113 mgu74av2.db 61 IlluminaHumanMethylation450kmanifest 1245 yeast2probe 45 gahgu95eprobe 27 TxDb.Scerevisiae.UCSC.sacCer3.sgdGene 84 nugohs1a520180probe 38 hcg110cdf 41 hgu95bcdf 44 bsubtiliscdf 38 gahgu95bcdf 23 TxDb.Rnorvegicus.UCSC.rn4.ensGene 262 pd.mg.u74bv2 38 mu19ksubbcdf 38 r10kcod.db 46 poplarcdf 42 drosgenome1.db 64 pedbarrayv10.db 54 vitisviniferacdf 42 hugene10stv1probe 49 HuO22.db 51 pd.hg.u133a.tag 40 mu11ksuba.db 51 genomewidesnp5Crlmm 155 xlaevis.db 53 Rattus.norvegicus 62 org.Rn.eg.db 1664 pd.rcngene.1.1.st 38 drosophila2cdf 43 rgu34c.db 52 HuExExonProbesetLocationHg19 39 mgu74av2cdf 47 mgu74bcdf 42 TxDb.Mmusculus.UCSC.mm9.knownGene 527 hgu95bprobe 42 mirna10probe 39 pd.bsubtilis 42 hcg110.db 55 hthgu133a.db 110 hugene11stprobeset.db 58 pd.ecoli 39 TxDb.Hsapiens.UCSC.hg18.knownGene 502 ragene20stprobeset.db 45 rhesus.db0 70 illuminaHumanv2.db 82 BSgenome.Mmusculus.UCSC.mm9 260 pd.zebgene.1.1.st 41 mogene10sttranscriptcluster.db 110 mouseCHRLOC 33 rae230acdf 43 bovine.db0 71 porcinecdf 42 moe430acdf 45 mgu74cv2.db 57 medicagocdf 41 canine2cdf 42 BSgenome.Rnorvegicus.UCSC.rn5.masked 39 BSgenome.Mmusculus.UCSC.mm10.masked 67 BSgenome.Drerio.UCSC.danRer7.masked 29 BSgenome.Gaculeatus.UCSC.gasAcu1.masked 29 BSgenome.Mmusculus.UCSC.mm8.masked 74 BSgenome.Mmulatta.UCSC.rheMac2.masked 32 BSgenome.Rnorvegicus.UCSC.rn4.masked 34 BSgenome.Ggallus.UCSC.galGal3.masked 29 BSgenome.Dmelanogaster.UCSC.dm2.masked 27 BSgenome.Mmusculus.UCSC.mm9.masked 49 MeSH.db 25 org.MeSH.Hsa.db 6 huex10stprobeset.db 40 pd.nugo.mm1a520177 29 org.MeSH.Aga.PEST.db 5 org.MeSH.Sau.RF122.db 5 org.MeSH.Tbr.9274.db 6 org.MeSH.Sau.M013.db 5 org.MeSH.Pae.PAO1.db 6 org.MeSH.Dgr.db 5 org.MeSH.Eco.O157.H7.TW14359.db 4 org.MeSH.Sau.USA300FPR3757.db 5 org.MeSH.Sau.N315.db 6 org.MeSH.Pfa.3D7.db 5 org.MeSH.Ddi.AX4.db 5 org.MeSH.Ocu.db 5 org.MeSH.Eco.SE11.db 5 org.MeSH.Lma.db 6 org.MeSH.Eco.UMN026.db 4 org.MeSH.Cal.SC5314.db 5 org.MeSH.Sau.ED98.db 6 org.MeSH.Eco.K12.MG1655.db 4 org.MeSH.Laf.db 5 org.MeSH.Dvi.db 6 MafDb.ALL.wgs.phase1.release.v3.20101123 17 org.MeSH.Bsu.RONN1.db 5 org.MeSH.Dsi.db 4 org.MeSH.Eco.O157.H7.Sakai.db 5 org.MeSH.Ana.db 6 org.MeSH.Cel.db 6 org.MeSH.Cja.db 6 org.MeSH.Eco.APEC01.db 4 org.MeSH.Sau.MRSA252.db 5 rae230a 4 SNPlocs.Hsapiens.dbSNP.20071016 5 lumiHumanV1 2 mouse4302 4 lumiRatV1 2 BSgenome.Mfuro.UCSC.musFur1 31 hugene10st.db 2 mgu74av2 5 SNPlocs.Hsapiens.dbSNP141.GRCh38 19 pd.drogene.1.0.st 31 pd.rabgene.1.1.st 29 pd.hta.2.0 112 pd.chogene.2.0.st 32 pd.rcngene.1.0.st 27 pd.soygene.1.0.st 30 pd.guigene.1.1.st 33 pd.rusgene.1.0.st 27 pd.chogene.2.1.st 28 pd.rjpgene.1.0.st 31 mta10sttranscriptcluster.db 13 hs133phsentrezgcdf 2 hs133pptensg7cdf 1 hs133phsug7probe 1 hs133bhsense7probe 2 hs133pptense7cdf 1 hs133bptense7probe 1 hwgcod 4 illuminaHumanv1 2 dmdrosophila2dmensg7probe 1 illuminaMousev1p1 2 hs133phsenst7probe 1 hs95av2ptensg7probe 1 hs133xptensg7cdf 1 u133x3p 3 hsex10stv2ptensg7cdf 2 hs133xhsense7probe 1 mm430mmense 3 gahgu95av2 2 gahgu133plus2 3 gahgu133a 3 dmdrosophila2dmrefseq 2 hsfocushsentrezgcdf 2 hs95av2ptensg7cdf 1 pd.soybean 44 org.Ag.eg.db 240 BSgenome.Scerevisiae.UCSC.sacCer1 94 mu11ksubbprobe 43 TxDb.Mmusculus.UCSC.mm10.knownGene 1327 gahgu95bprobe 28 pd.rhegene.1.1.st 39 ratCHRLOC 34 canine.db 52 mgu74acdf 42 pd.drosgenome1 40 gahgu133a.db 30 ygs98frmavecs 26 m20kcod.db 41 SIFT.Hsapiens.dbSNP137 88 hgu95av2.db 734 oligoData 88 BSgenome.Hsapiens.UCSC.hg19 2521 hgu219.db 114 hu6800subbcdf 38 BSgenome.Hsapiens.UCSC.hg18 253 org.Mm.eg.db 8584 pd.ecoli.asv2 39 org.EcK12.eg.db 366 pd.zebrafish 40 drosophila2.db 56 ecoliasv2probe 44 hgu95dprobe 42 hgug4111a.db 55 TxDb.Scerevisiae.UCSC.sacCer2.sgdGene 37 pd.rhesus 44 pd.barley1 40 pd.yg.s98 39 hu35ksubbprobe 41 org.Gg.eg.db 430 pd.wheat 46 mu11ksubaprobe 45 IlluminaHumanMethylation27kmanifest 46 pd.cyngene.1.0.st 40 pd.hg.focus 41 bsubtilisprobe 45 yeast2.db 65 hgu133a2frmavecs 26 hgu133aprobe 167 ygs98cdf 45 ygs98.db 56 ragene21stprobeset.db 43 drosophila2probe 171 hgfocuscdf 66 bovinecdf 46 gahgu133plus2.db 28 pd.aragene.1.0.st 38 mogene21stprobeset.db 46 hgu133a2probe 52 org.Ce.eg.db 544 BSgenome.Cfamiliaris.UCSC.canFam2 45 mu19ksubccdf 39 huex.1.0.st.v2frmavecs 33 HuExExonProbesetLocation 37 pd.ovigene.1.1.st 43 org.Bt.eg.db 464 hu6800subdcdf 40 org.Dr.eg.db 856 pd.xenopus.laevis 40 nugohs1a520180cdf 39 org.Tgondii.eg.db 24 HsAgilentDesign026652.db 89 hu35ksubaprobe 43 hugene11sttranscriptcluster.db 89 pd.drosophila.2 39 hgu133b.db 77 gahgu133plus2cdf 31 IlluminaHumanMethylation450kanno.ilmn12.hg19 1473 lumiMouseIDMapping 44 htmg430acdf 44 plasmodiumanophelesprobe 40 mogene.1.0.st.v1frmavecs 23 illuminaHumanv4.db 317 hgfocus.db 80 BSgenome.Btaurus.UCSC.bosTau6 51 human370quadv3cCrlmm 35 ecoli2cdf 41 adme16cod.db 48 mgu74bv2cdf 41 hugene21stprobeset.db 49 pd.mouse430a.2 42 worm.db0 68 hugene10stprobeset.db 62 citrusprobe 42 JazaeriMetaData.db 54 mu6500subacdf 39 hu6800subacdf 37 gahgu95cprobe 29 hi16cod.db 43 ragene20sttranscriptcluster.db 46 chimp.db0 67 pd.mapping250k.nsp 163 hwgcod.db 44 pd.cytogenetics.array 49 moe430bprobe 43 pd.hg18.60mer.expr 67 KEGG.db 285 SNPlocs.Hsapiens.dbSNP.20100427 31 htmg430pmprobe 41 mu19ksuba.db 48 rnu34.db 53 BSgenome.Drerio.UCSC.danRer5 42 ragene10stv1cdf 37 mouse4302cdf 124 pd.rjpgene.1.1.st 35 hom.Dm.inp.db 34 hthgu133b.db 51 rgu34b.db 53 pd.mg.u74b 37 hgug4112a.db 93 mogene11sttranscriptcluster.db 57 hthgu133bprobe 44 pd.rice 61 illuminaMousev1p1.db 44 humancytosnp12v2p1hCrlmm 27 BSgenome.Dmelanogaster.UCSC.dm2 63 BSgenome.Ptroglodytes.UCSC.panTro2 44 pd.pae.g1a 39 hom.Dr.inp.db 29 gahgu133plus2probe 27 BSgenome.Drerio.UCSC.danRer6 41 pd.soygene.1.1.st 48 rhesuscdf 43 hom.Rn.inp.db 36 h20kcod.db 44 mogene21sttranscriptcluster.db 57 hgubeta7.db 55 pd.mouse430.2 75 pd.ht.mg.430a 40 mu11ksubb.db 52 wheatcdf 44 BSgenome.Dmelanogaster.UCSC.dm3 241 pd.ragene.1.1.st.v1 46 soybeancdf 107 poplarprobe 42 hgu133acdf 227 rgug4131a.db 51 pd.celegans 42 pd.rg.u34a 42 mgug4121a.db 55 porcineprobe 46 tomatoprobe 43 canineprobe 42 moe430bcdf 41 pd.rg.u34b 37 pd.hg.u95b 38 mguatlas5k.db 52 FDb.UCSC.snp137common.hg19 39 mirna20cdf 39 hugene.1.0.st.v1frmavecs 29 pd.hg.u133.plus.2 229 org.Cf.eg.db 436 tomatocdf 38 TxDb.Athaliana.BioMart.plantsmart16 8 hugene20sttranscriptcluster.db 84 BSgenome.Rnorvegicus.UCSC.rn4 60 Roberts2005Annotation.db 51 mogene20stprobeset.db 42 ath1121501probe 47 BSgenome.Celegans.UCSC.ce2 336 pd.mg.u74c 36 htratfocusprobe 43 pd.sugar.cane 38 humanomni5quadv1bCrlmm 26 canine2.db 56 pd.hu6800 58 rnu34probe 40 canine2probe 45 mouse430a2frmavecs 25 pd.2006.07.18.mm8.refseq.promoter 40 pd.plasmodium.anopheles 39 pd.hc.g110 37 pd.charm.hg18.example 41 pd.hg.u133b 43 BSgenome.Ptroglodytes.UCSC.panTro2.masked 30 BSgenome.Mmulatta.UCSC.rheMac3.masked 34 BSgenome.Sscrofa.UCSC.susScr3 35 TxDb.Athaliana.BioMart.plantsmart21 3 raex10stprobeset.db 45 MeSH.AOR.db 24 MeSH.PCR.db 23 org.MeSH.Atu.K84.db 6 org.MeSH.Bsu.168.db 6 org.MeSH.Syn.db 6 huex10sttranscriptcluster.db 58 phastCons100way.UCSC.hg19 192 org.MeSH.Ani.FGSC.db 5 org.MeSH.Eqc.db 5 org.MeSH.Bsu.Bsn5.db 5 org.MeSH.Der.db 5 org.MeSH.Dya.db 5 org.MeSH.Eco.536.db 4 org.MeSH.Eco.55989.db 5 org.MeSH.Mmu.db 5 org.MeSH.Cin.db 6 org.MeSH.Cfa.db 5 org.MeSH.Bsu.TUB10.db 5 MafDb.ESP6500SI.V2.SSA137.dbSNP138 6 org.MeSH.Mtr.db 5 org.MeSH.Pae.PA14.db 5 org.MeSH.Sau.COL.db 5 org.MeSH.Cbr.db 5 org.MeSH.Eco.SMS35.db 5 org.MeSH.Dda.3937.db 5 org.MeSH.Gma.db 5 org.MeSH.Rno.db 5 org.MeSH.Bta.db 6 org.MeSH.Mml.db 4 org.MeSH.Eco.E24377A.db 6 humanomni258v1aCrlmm 2 org.MeSH.Miy.db 6 BSgenome.Hsapiens.NCBI.b36v3 2 hu6800 4 xlahomology 5 hsahomology 4 illuminaMousev2BeadID.db 10 org.MeSH.Ptr.db 5 illuminaMousev1p1BeadID.db 7 illuminaRatv1BeadID.db 6 mogene10stv1.r3cdf 1 SNPlocs.Hsapiens.dbSNP.20080617 7 TxDb.Hsapiens.UCSC.hg38.knownGene 2415 ChemmineDrugs 58 pd.elegene.1.1.st 30 pd.elegene.1.0.st 31 pd.guigene.1.0.st 29 pd.chigene.1.1.st 33 pd.rusgene.1.1.st 33 mta10stprobeset.db 13 XtraSNPlocs.Hsapiens.dbSNP141.GRCh38 19 ath1attair 3 mm74av1mmentrezgprobe 2 illuminaHumanv4BeadID.db 3 ragene10stv1.r3cdf 1 hs133bhsrefseq7cdf 1 hs133bptensg7cdf 1 yeast2 4 btahomology 4 domainsignatures 0 hs95av2hsentrezgcdf 3 drosophila2 3 hgu133b 4 hs133av2hsentrezg 2 hguatlas13k 4 hs133xhsrefseq7probe 1 gmahomology 3 gahgu95d 2 m20kcod 5 hs133av2ptensg7cdf 1 cfcanine2cfense7cdf 1 htmg430bcdf 38 gahgu95e.db 26 nugomm1a520177probe 39 BSgenome.Amellifera.BeeBase.assembly4 44 hgu95av2probe 324 pd.equgene.1.0.st 39 pd.081229.hg18.promoter.medip.hx1 38 HuExExonProbesetLocationHg18 35 org.Pt.eg.db 275 hapmap370k 46 soybeanprobe 41 xtropicaliscdf 39 rwgcod.db 43 pd.felgene.1.1.st 41 hgu95av2cdf 373 GGHumanMethCancerPanelv1.db 39 TxDb.Athaliana.BioMart.plantsmart10 11 hgu95ccdf 44 pd.rg.u34c 38 BSgenome.Celegans.UCSC.ce6 56 ecoliK12.db0 69 pd.rat230.2 58 hu6800cdf 43 ecoliasv2cdf 41 pd.ag 43 yeast2cdf 46 htrat230pmprobe 40 xenopuslaevisprobe 43 primeviewcdf 79 hu35ksubb.db 51 rat2302probe 45 pd.mogene.2.0.st 92 mi16cod.db 43 pd.ragene.2.0.st 43 pd.rae230a 39 pd.ht.hg.u133.plus.pm 50 gp53cdf 40 hu35ksubdcdf 40 FDb.InfiniumMethylation.hg18 65 mm24kresogen.db 38 pd.cangene.1.1.st 41 rgu34acdf 45 DO.db 1358 pd.cotton 37 mogene10stv1probe 40 illuminaHumanv2BeadID.db 44 pig.db0 69 pd.cyrgene.1.0.st 41 seqnames.db 12 rae230aprobe 86 mgu74aprobe 42 fly.db0 67 mgu74c.db 53 pd.mg.u74a 38 celegans.db 76 pd.mogene.1.0.st.v1 98 PolyPhen.Hsapiens.dbSNP131 101 human610quadv1bCrlmm 59 pd.genomewidesnp.5 170 TxDb.Mmusculus.UCSC.mm10.ensGene 125 hom.Mm.inp.db 35 test3probe 41 PFAM.db 574 org.Pf.plasmo.db 136 ygs98probe 42 mgu74av2probe 41 yeast.db0 71 Norway981.db 51 illuminaHumanv3.db 243 hgu133plus2frmavecs 46 PANTHER.db 194 htratfocuscdf 41 TxDb.Rnorvegicus.UCSC.rn5.refGene 94 rgu34cprobe 43 m10kcod.db 43 PartheenMetaData.db 55 TxDb.Hsapiens.UCSC.hg19.knownGene 4619 mgu74bprobe 43 TxDb.Athaliana.BioMart.plantsmart14 7 SNPlocs.Hsapiens.dbSNP.20090506 31 hcg110probe 40 hugene10sttranscriptcluster.db 577 pd.x.laevis.2 41 hgu133plus2probe 125 gahgu95av2probe 29 celegansprobe 45 BSgenome.Alyrata.JGI.v1 47 ag.db 60 RaExExonProbesetLocation 43 hgug4100a.db 55 mouse.db0 82 test3cdf 45 ragene10sttranscriptcluster.db 52 hu6800subccdf 38 hu35ksubd.db 53 riceprobe 48 ragene11sttranscriptcluster.db 54 FDb.UCSC.tRNAs 100 saureuscdf 39 gahgu95dcdf 24 Mu15v1.db 54 cMAP 62 BSgenome.Ecoli.NCBI.20080805 136 pd.cyngene.1.1.st 37 ragene10stv1probe 40 mu11ksubacdf 40 pd.ath1.121501 42 pd.genomewidesnp.6 210 mgug4120a.db 53 pd.moe430b 38 citruscdf 41 agcdf 42 zebrafishcdf 48 rattoxfxcdf 34 BSgenome.Mmulatta.UCSC.rheMac2 38 bovine.db 55 mouse430a2.db 87 rgug4130a.db 54 pd.equgene.1.1.st 43 MoExExonProbesetLocation 39 gahgu95dprobe 29 xenopus.db0 64 hgu95eprobe 42 htrat230pmcdf 40 BSgenome.Amellifera.UCSC.apiMel2 44 nugomm1a520177cdf 35 hivprtplus2cdf 40 rat2302cdf 59 hgu95d.db 59 medicagoprobe 44 pd.mapping250k.sty 159 rattoxfxprobe 38 gahgu95av2cdf 25 pd.hg.u95a 91 pedbarrayv9.db 51 humanomni25quadv1bCrlmm 26 mu11ksubbcdf 41 pd.2006.10.31.rn34.refseq.promoter 37 pd.rhegene.1.0.st 56 test1cdf 38 MmAgilentDesign026655.db 53 mu19ksubb.db 52 rat2302.db 87 hgu133bprobe 49 hthgu133pluspmprobe 42 hugene20stprobeset.db 50 hguDKFZ31.db 53 hthgu133pluspmcdf 57 zebrafish.db 54 SNPlocs.Hsapiens.dbSNP.20120608 37 pd.feinberg.hg18.me.hx1 43 BSgenome.Rnorvegicus.UCSC.rn5 83 ricecdf 50 pd.mirna.2.0 38 humanomniexpress12v1bCrlmm 33 reactome.db 3603 BSgenome.Mmulatta.UCSC.rheMac3 35 FDb.UCSC.snp135common.hg19 39 gahgu95ccdf 23 mgug4122a.db 55 human370v1cCrlmm 147 hu35ksubbcdf 41 hgu133atagcdf 62 BSgenome.Btaurus.UCSC.bosTau4 48 malaria.db0 64 BSgenome.Mmusculus.UCSC.mm10 1186 SHDZ.db 53 mouse4302probe 49 ecoliprobe 41 hgu95acdf 146 BSgenome.Ggallus.UCSC.galGal4.masked 29 BSgenome.Btaurus.UCSC.bosTau6.masked 46 rgu34ccdf 39 BSgenome.Cfamiliaris.UCSC.canFam3.masked 32 BSgenome.Btaurus.UCSC.bosTau3.masked 34 BSgenome.Amellifera.UCSC.apiMel2.masked 31 BSgenome.Tguttata.UCSC.taeGut1.masked 27 BSgenome.Tguttata.UCSC.taeGut1 30 org.MeSH.Aca.db 6 pd.nugo.hs1a520180 31 org.MeSH.Eco.O157.H7.EC4115.db 5 org.MeSH.Dmo.db 4 org.MeSH.Oni.db 5 org.MeSH.Sau.MW2.db 5 org.MeSH.Pae.PA7.db 5 org.MeSH.Eco.UTI89.db 5 org.MeSH.Zma.db 5 org.MeSH.Tgu.db 5 moex10stprobeset.db 44 org.MeSH.Osa.db 6 org.MeSH.Tgo.ME49.db 5 org.MeSH.Sau.USA300TCH1516.db 5 org.MeSH.Eco.O26.H11.11368.db 5 raex10sttranscriptcluster.db 45 org.MeSH.Pab.db 5 org.MeSH.Vvi.db 6 org.MeSH.Eco.O157.H7.EDL933.db 5 org.MeSH.Ame.db 5 org.MeSH.Eco.K12.DH10B.db 5 org.MeSH.Eco.O26.H7.CB9615.db 5 org.MeSH.Bfl.db 6 org.MeSH.Spu.db 5 org.MeSH.Dan.db 5 hugene10stv1.r3cdf 1 agahomology 4 ag 4 athhomology 4 adme16cod 4 GO 4 hgu133a 4 illuminaHumanv3BeadID.db 6 org.MeSH.Eco.HS.db 6 humanomni258v1p1bCrlmm 2 illuminaMousev1BeadID.db 5 illuminaHumanDASLBeadID.db 6 illuminaHumanv1BeadID.db 10 YEAST 4 org.Hs.sp.db 3 cfcanine2cfenst7cdf 1 mogene10st.db 1 Hspec 26 pd.medgene.1.1.st 27 pd.margene.1.0.st 28 pd.medgene.1.0.st 31 pd.fingene.1.1.st 28 pd.rabgene.1.0.st 31 pd.chigene.1.0.st 28 hs133ahsentrezgcdf 3 TxDb.Rnorvegicus.BioMart.igis 30 hspeccdf 26 BSgenome.Rnorvegicus.UCSC.rn6 138 BSgenome.Dmelanogaster.UCSC.dm6 177 ath1atrefseq 3 mm74av1mmentrezgcdf 2 illuminaHumanv2 2 hs133ahsentrezg 3 hs133phsentrezg 3 hs133pptense7probe 1 hs133phsrefseq7probe 1 hs133phsentrezg7cdf 1 h20kcod 4 mouse430a2 4 hgfocus 4 hs133aptentrezgprobe 3 dmdrosophila2dmenst7cdf 1 hs133xhsensg7probe 1 dmdrosophila2dmense7probe 1 hs133bhsentrezg7probe 1 lumiHumanIDMapping.db 1 org.Rn.sp.db 4 rwgcod 4 gahgu95e 3 hsex10stv2hsrefseq 1 hsex10stv2hsrefseqprobe 1 dmgenome1dmenst7probe 1 dmgenome1dmensg7cdf 1 lumiMouseV1 2 ri16cod.db 48 hu35ksubcprobe 43 pd.mg.u74av2 40 mgu74cprobe 42 zebrafish.db0 64 cyp450cdf 38 hgu95dcdf 40 hgfocusprobe 65 mirna10cdf 47 rgu34bprobe 43 mgu74cv2cdf 38 mogene10stv1cdf 65 hthgu133bcdf 42 xenopuslaeviscdf 42 rae230b.db 53 rtu34.db 51 test2cdf 40 htmg430pmcdf 42 hgu133a2cdf 133 org.At.tair.db 821 caninecdf 42 pd.yeast.2 38 mogene11stprobeset.db 54 TxDb.Athaliana.BioMart.plantsmart12 10 cottonprobe 44 hu35ksubacdf 39 BSgenome.Cfamiliaris.UCSC.canFam3 65 mgu74b.db 56 hgu95aprobe 45 hgu95av2 94 paeg1aprobe 40 chicken.db0 74 TxDb.Athaliana.BioMart.plantsmart19 6 maizeprobe 43 POCRCannotation.db 53 indac.db 52 pd.rae230b 39 gahgu95c.db 27 illuminaHumanWGDASLv3.db 37 org.EcSakai.eg.db 242 u133x3p.db 64 SNPlocs.Hsapiens.dbSNP.20110815 25 pd.bovine 45 GO.db 24305 zebrafishprobe 46 saureusprobe 45 humanomni1quadv1bCrlmm 31 org.Hs.eg.db 20455 hgug4101a.db 52 pd.x.tropicalis 41 targetscan.Mm.eg.db 46 htmg430bprobe 40 gahgu133b.db 28 org.Ss.eg.db 466 ragene11stprobeset.db 50 pd.citrus 43 hgug4110b.db 57 rgu34aprobe 41 hgu133a.db 826 pd.hg.u95d 40 ecoliSakai.db0 67 lumiHumanIDMapping 107 hgu95ecdf 41 hgu133bcdf 66 hu35ksubdprobe 43 pd.hugene.2.1.st 134 pd.ragene.2.1.st 38 rat.db0 72 org.Hs.ipi.db 32 mu6500subccdf 39 BSgenome.Celegans.UCSC.ce10 73 illuminaRatv1.db 46 moe430b.db 54 pd.moe430a 44 pd.rn.u34 36 gahgu95ecdf 23 barley1probe 43 gahgu133acdf 25 human550v3bCrlmm 31 arabidopsis.db0 74 pd.s.aureus 40 genomewidesnp6Crlmm 175 u133x3pprobe 42 lumiRatIDMapping 42 mouse430a2probe 43 pd.hg.u95c 37 canine.db0 69 pd.canine 39 gahgu95d.db 26 chicken.db 52 illuminaMousev1.db 45 ecoli2.db 52 Mus.musculus 293 rgug4105a.db 52 BSgenome.Mmusculus.UCSC.mm8 86 mu19ksubc.db 52 BSgenome.Ggallus.UCSC.galGal4 38 hgu95e.db 53 TxDb.Dmelanogaster.UCSC.dm3.ensGene 512 moe430aprobe 43 rnu34cdf 42 pd.ht.hg.u133a 45 cottoncdf 41 rgu34bcdf 40 illuminaHumanWGDASLv4.db 40 pd.hugene.2.0.st 103 ragene21sttranscriptcluster.db 44 nugomm1a520177.db 40 mouse4302.db 211 hu35ksuba.db 53 wheatprobe 41 rae230bprobe 47 mu6500subbcdf 42 humanCHRLOC 73 primeviewprobe 38 pd.hg.u219 56 pd.poplar 38 Hs6UG171.db 52 pd.mogene.1.1.st.v1 64 xlaevis2cdf 37 u133x3pcdf 44 mu6500subdcdf 39 lumiHumanAll.db 84 mirbase.db 170 BSgenome.Ggallus.UCSC.galGal3 59 IlluminaHumanMethylation450k.db 36 Homo.sapiens 854 nugohs1a520180.db 41 pd.mirna.1.0 37 chickencdf 42 sugarcaneprobe 43 ecoli2probe 40 gahgu95b.db 26 pd.maize 38 pd.huex.1.0.st.v2 131 hguqiagenv3.db 54 hu6800.db 224 hs25kresogen.db 44 vitisviniferaprobe 44 pd.porcine 42 pd.mirna.3.0 38 IlluminaHumanMethylation450kprobe 42 mgu74cv2probe 42 pd.mu11ksuba 39 hgu95a.db 658 rguatlas4k.db 50 mwgcod.db 47 hugene21sttranscriptcluster.db 55 hgu133plus2.db 1878 pd.feinberg.mm8.me.hx1 41 pd.mu11ksubb 39 pd.mg.u74cv2 38 lumiRatAll.db 44 BSgenome.Ptroglodytes.UCSC.panTro3 36 pd.raex.1.0.st.v1 46 ye6100subacdf 39 illuminaHumanv1.db 68 hugene10stv1cdf 129 org.Dm.eg.db 1001 pd.cyrgene.1.1.st 38 hthgu133aprobe 44 BSgenome.Athaliana.TAIR.04232008 47 ath1121501.db 80 BSgenome.Hsapiens.UCSC.hg19.masked 146 sugarcanecdf 38 LAPOINTE.db 52 human660quadv1aCrlmm 31 human1mduov3bCrlmm 34 org.Mmu.eg.db 472 pd.felgene.1.0.st 37 BSgenome.Hsapiens.NCBI.GRCh38 615 BSgenome.Btaurus.UCSC.bosTau4.masked 30 BSgenome.Ptroglodytes.UCSC.panTro3.masked 27 BSgenome.Dmelanogaster.UCSC.dm3.masked 31 BSgenome.Hsapiens.UCSC.hg17.masked 40 BSgenome.Hsapiens.UCSC.hg18.masked 48 BSgenome.Drerio.UCSC.danRer5.masked 29 BSgenome.Cfamiliaris.UCSC.canFam2.masked 30 BSgenome.Drerio.UCSC.danRer6.masked 28 BSgenome.Sscrofa.UCSC.susScr3.masked 32 moex10sttranscriptcluster.db 42 org.MeSH.Eco.CFT073.db 5 org.MeSH.Aml.db 6 org.MeSH.Oan.db 6 org.MeSH.Eco.IAI39.db 5 org.MeSH.Pae.LESB58.db 6 org.MeSH.Mes.db 5 org.MeSH.Sil.db 5 org.MeSH.Sau.MSSA476.db 5 org.MeSH.Eco.O127.H6.E2348.69.db 5 org.MeSH.Nle.db 5 org.MeSH.Eco.IAI1.db 5 org.MeSH.Eco.KO11FL.db 5 org.MeSH.Mdo.db 5 org.MeSH.Xtr.db 5 org.MeSH.Gga.db 4 org.MeSH.Sau.Mu50.db 5 org.MeSH.Dpe.db 4 org.MeSH.Spo.972h.db 5 org.MeSH.Sau.Mu3.db 5 org.MeSH.Sau.VC40.db 5 org.MeSH.Eco.ED1a.db 5 org.MeSH.Dme.db 4 org.MeSH.Pto.db 6 org.MeSH.Eco.S88.db 5 org.MeSH.Eco.O111.H.11128.db 5 org.MeSH.Ssc.db 5 org.MeSH.Sco.A32.db 5 org.MeSH.Cre.db 5 org.MeSH.Xla.db 6 org.MeSH.Sce.S288c.db 5 org.MeSH.Bsu.W23.db 5 org.MeSH.Dre.db 5 org.MeSH.Eco.O103.H2.12009.db 5 org.MeSH.Eco.BW2952.db 5 org.MeSH.Cpo.db 6 org.MeSH.Ath.db 5 org.MeSH.Mga.db 5 org.MeSH.Sau.Newman.db 5 org.MeSH.Dse.db 5 BSgenome.Athaliana.TAIR.01222004 10 ath1121501 4 BSgenome.Dmelanogaster.FlyBase.r51 2 IlluminaHumanMethylation450kannotation.ilmn.v1.2 5 celegans 3 KEGG 4 illuminaHumanv3ProbeID.db 2 rat2302 5 org.MeSH.Eco.B.REL606.db 6 org.MeSH.Sau.MSHR1132.db 5 humanLLMappings 3 miRNAtap.db 98 hgu133plus2 4 cfcanine2cfensg7cdf 1 TxDb.Hsapiens.BioMart.igis 29 TxDb.Athaliana.BioMart.plantsmart22 160 pd.fingene.1.0.st 33 pd.margene.1.1.st 29 pd.mirna.4.0 44 pd.drogene.1.1.st 28 hs133ahsensgcdf 3 atgenomeattigr7probe 1 hs133bptensg7probe 1 hgu95a 4 atgenomeattigr7cdf 1 hs133bhsense7cdf 1 dmgenome1dmrefseq7probe 1 hgu95e 4 TxDb.Mmusculus.BioMart.igis 0 KEGGprofile 0 mgug4122a 4 lumiHumanV2 3 Masks.Dmelanogaster.UCSC.dm3 8 illuminaMousev1 2 TxDb.Scerevisiae.UCSC.sacCer2.ensGene 1 hvuhomology 4 hgu133a2 3 gahgu133b 2 gahgu95b 2 gahgu95c 2 hs133aptense7probe 1 hs95av2hsense 2 MeSH.Bsu.168.eg.db 19 rtu34 4 rnohomology 3 rn34arnugcdf 2 rn34arnugprobe 2 rn34arnrefseqcdf 2 rn34arnenstprobe 2 rn34arnensgcdf 3 rn230rnenst 2 rn230rnensgprobe 3 rn230brnrefseqcdf 2 rn230brnenstprobe 2 EnsDb.Hsapiens.v75 774 hta20stprobeset.db 11 hta20sttranscriptcluster.db 11 EnsDb.Mmusculus.v79 683 MeSH.Lma.eg.db 17 MeSH.Ptr.eg.db 19 MeSH.Gma.eg.db 18 pd.mta.1.0 43 MeSH.Mes.eg.db 15 MeSH.Mga.eg.db 18 MeSH.Eco.55989.eg.db 16 MeSH.Eco.O127.H6.E2348.69.eg.db 11 MeSH.Gga.eg.db 16 MeSH.Aga.PEST.eg.db 18 MeSH.Aml.eg.db 17 MeSH.Ana.eg.db 16 MeSH.Bta.eg.db 17 MeSH.Cin.eg.db 18 MeSH.Cpo.eg.db 18 MeSH.Nle.eg.db 17 MeSH.Rno.eg.db 18 MeSH.Sau.USA300TCH1516.eg.db 11 MeSH.Vvi.eg.db 17 MeSH.Xtr.eg.db 18 grasp2db 57 XtraSNPlocs.Hsapiens.dbSNP144.GRCh38 68 hu35ksubb 5 hsfocushsvegat 2 TxDb.Athaliana.BioMart.plantsmart28 57 sschomology 4 scehomology 3 vvgrapevvtigr7probe 1 rnex10stv1rnense7cdf 1 rn34arnense7probe 1 rnex10stv1rnentrezg7cdf 1 rnex10stv1rnenst7cdf 1 rn230rnentrezg7probe 2 rn230rnensg7cdf 1 rn34arnenst7cdf 1 rn230rnensg7probe 2 rn230brnensg7probe 2 rn230arnensg7cdf 1 rn230arnense7cdf 1 rn230brnenst7probe 1 rn230brnense7probe 1 rn230arnrefseq7probe 1 rgu34b 5 ratLLMappings 4 ptrhomology 4 mm11ksubammensg7probe 1 hs133xptense7probe 1 osriceosrefseq7probe 1 dmdrosophila2dmug7cdf 1 osriceostigr7probe 2 cfcanine2cfug7cdf 1 hsfocusptense7cdf 1 mgug4104a 5 moe430a 4 hsex10stv2hsentrezg7probe 1 mm430ammentrezg7cdf 2 hs133bhsenst7cdf 1 mm74av2mmrefseq7cdf 1 mm11ksubammenst7probe 1 mm74av1mmug7probe 1 mm11ksubammug7cdf 1 cinhomology 3 mm74av2mmensg7probe 1 hs133ahsentrezg7cdf 1 drzebrafishdrenst7probe 1 mm430ammug7probe 1 dmgenome1dmrefseq7cdf 1 hs133xhsenst7cdf 2 BSgenome.Vvinifera.URGI.IGGP12Xv2 31 hs95av2hsentrezg7cdf 1 MmusculusGenome.mm7 1 drzebrafishdrensg7cdf 1 hs133av2hsensg7cdf 1 dmgenome1dmense7probe 1 hu35ksubc 4 hsex10stv2ptensg7probe 1 hs133phsense7probe 1 mm430mmense7cdf 1 mu19ksubb 4 hs95av2hsentrezg7probe 1 mm74av2mmense7probe 2 mmex10stv1mmenst7cdf 1 hs133phsug7cdf 1 mm430bmmenst7probe 1 hsex10stv2hsentrezg7cdf 1 hs95av2hsenst7cdf 1 hs133xhsug7cdf 1 hsfocushsensg7cdf 1 mm11ksubammvegagprobe 1 rn230brnenst 3 mm430a2mmrefseq 2 hsfocusptrefseq 2 mm430a2mmensecdf 1 atgenomeattair 2 ggchickenggensg7probe 1 mm74bv2mmvegaecdf 2 hs95av2ptense 2 hs133av2ptentrezgcdf 2 hs133xptentrezgprobe 3 mm74bv2mmenst 3 ggchickenggense 2 mm11ksubbmmenstcdf 2 drzebrafishdrrefseqcdf 2 hsfocusptensecdf 2 mm430bmmrefseq7cdf 2 HsapiensGenome.hg17 1 cfcanine2cfvegatprobe 1 mm74av1mmenstprobe 2 drehomology 3 mm11ksubammrefseq7probe 1 mm74av1mmense7cdf 2 mm11ksubbmmentrezg7cdf 1 mm430a2mmrefseqprobe 2 hs95av2ptentrezg 2 ath1atrefseqprobe 2 org.Hs.cross.db 8 mm430bmmugcdf 2 mm74av2mmugprobe 3 ggchickenggenstprobe 2 btbovinebtense 2 BSgenome.Mmusculus.UCSC.mm6 1 klahomology 4 moe430b 4 illuminaRatv1 2 mm430ammense7cdf 2 hsfocusptense 2 mm430ammrefseqprobe 2 dmdrosophila2dmugprobe 2 mm430bmmrefseqcdf 3 mmex10stv1mmentrezg7cdf 1 mm430ammrefseq7probe 1 mm430ammrefseq 2 hs133bptrefseq 2 mm430a2mmvegatprobe 2 BSgenome.Vvinifera.URGI.IGGP12Xv0 28 hs133bptenstprobe 2 mm11ksubammvegaeprobe 1 hs133av2hsensg 2 mm74av2mmug 3 mm74cv2mmugprobe 3 mm74bv2mmense 2 hs95av2hsensg7cdf 1 hs133pptense 3 mm11ksubbmmvegaecdf 1 mm430mmvegatcdf 2 btbovinebtentrezgprobe 2 mm430mmvegagcdf 2 mm430mmvegat 2 mm74av1mmensgprobe 3 mm74av1mmentrezg 2 mm74av1mmrefseqprobe 2 mm74av1mmug 3 mm74av1mmugcdf 3 mm74av1mmvegag 2 mm74av2mmensgcdf 3 mm74av2mmensgprobe 3 mm74av2mmenstcdf 2 mm74av2mmentrezgcdf 3 mm74av2mmvegaecdf 2 mm74bv2mmenstcdf 3 mm74bv2mmrefseq 3 mm74bv2mmvegagcdf 2 mm74cv2mmugcdf 2 mm74bv2mmvegatcdf 1 mm74cv2mmenseprobe 2 mpedbarray 2 OperonHumanV3 3 osriceosrefseqprobe 2 pedbarrayv9 3 ri16cod 4 Roberts2005Annotation 3 hs133xptense 2 hs133xptensecdf 3 hs133xhsrefseqcdf 2 hs95av2hsensecdf 2 hs95av2hsensgprobe 2 hs95av2hsrefseqprobe 2 hs95av2hsensgcdf 3 hs95av2ptentrezgcdf 3 hsex10stv2hsense 1 hsex10stv2hsenstprobe 1 hsex10stv2ptense 2 hsex10stv2ptensecdf 1 hsex10stv2ptensg 1 hsex10stv2ptensgcdf 1 hsex10stv2ptenstcdf 2 hsex10stv2ptenstprobe 2 hsfocushsenst 2 hsfocushsentrezg 3 hsfocushsrefseqprobe 3 hsfocushsug 2 hsfocusptenseprobe 2 hsfocusptentrezg 3 m10kcod 4 mm11ksubammensgprobe 3 mm11ksubammenstcdf 2 mm11ksubammentrezgcdf 3 mm11ksubammrefseqcdf 2 mm11ksubammugprobe 3 mm11ksubbmmrefseqcdf 2 mm11ksubbmmug 2 mm430ammenstprobe 2 mm430bmmensecdf 2 mm430bmmensgcdf 2 mm430bmmenstcdf 3 mmex10stv1mmenst 1 atgenomeattaircdf 2 ath1atrefseqcdf 2 MeSH.Eco.O157.H7.EC4115.eg.db 0 MeSH.Pae.PA7.eg.db 0 MeSH.Pae.PA14.eg.db 0 MeSH.Eco.BW2952.eg.db 0 MeSH.Eco.536.eg.db 0 MeSH.Sau.RF122.eg.db 0 MeSH.Sau.N315.eg.db 0 btbovinebtenstcdf 2 dmdrosophila2dmenst 2 btbovinebtentrezg 2 canine2 3 cfcanine2cfrefseq 2 cfcanine2cfrefseqprobe 2 dmgenome1dmenseprobe 2 dmgenome1dmensgprobe 2 dmgenome1dmrefseqprobe 2 drzebrafishdrensgcdf 2 ggchickenggensecdf 2 ggchickenggugcdf 2 hcgi8k 1 drzebrafishdrentrezg 2 hs133ahsenseprobe 3 hs133ahsensgprobe 2 hs133ahsentrezgprobe 2 hs133ahsrefseqprobe 3 hs133ahsvegaecdf 2 hs133ahsvegagprobe 2 hs133ahsvegat 2 hs133aptensgprobe 3 hs133aptenstprobe 3 hs133aptrefseqcdf 1 hs133av2hsenst 3 hs133av2hsentrezgprobe 2 hs133av2hsvegagprobe 2 hs133av2hsvegat 2 hs133av2ptense 2 hs133av2ptrefseq 1 hs133av2ptrefseqprobe 2 hs133bhsensg 3 hs133bhsensgcdf 3 hs133bhsenst 3 hs133bhsentrezg 3 hs133bhsrefseq 3 hs133bhsrefseqcdf 3 hs133bhsrefseqprobe 3 hs133bhsug 3 hs133bhsugcdf 3 hs133bptrefseqprobe 2 hs133phsensgprobe 3 hs133phsenst 3 hs133phsenstprobe 2 hs133phsug 3 hs133phsugcdf 3 hs133phsvegae 2 rn230arnensecdf 3 rn230arnensg 3 rn230arnrefseqcdf 3 rn230arnrefseqprobe 3 rn230arnugprobe 3 rn230brnense 2 rn34arnensecdf 2 mmex10stv1mmentrezgprobe 1 dmdrosophila2dmense7cdf 1 dmdrosophila2dmenst7probe 1 dmgenome1dmug7probe 1 drzebrafishdrense7cdf 1 drzebrafishdrentrezg7cdf 1 drzebrafishdrentrezg7probe 1 drzebrafishdrrefseq7cdf 1 hs133pptensgcdf 3 hs133pptenstprobe 2 hs133pptentrezgprobe 3 hs133pptrefseq 2 hs133xhsense 3 hs133xhsvegaecdf 2 hs133xhsvegaeprobe 2 hs133xhsvegag 1 hs133xptrefseq 2 hs133xptrefseqprobe 2 hs95av2hsvegaecdf 2 hsfocushsvegaeprobe 2 hsfocushsvegagprobe 2 hsfocushsvegatprobe 1 mamurhesusmamuenseprobe 2 mamurhesusmamuugcdf 1 mamurhesusmamuugprobe 1 mm11ksubammvegae 1 mm11ksubammvegagcdf 2 mm11ksubbmmvegagcdf 1 mm11ksubbmmvegatcdf 2 mm430a2mmugprobe 1 mm430a2mmvegaecdf 1 mm430a2mmvegagcdf 1 mm430ammvegae 2 mm430bmmvegaecdf 2 hs133av2hsrefseq7cdf 1 hs133av2hsrefseq7probe 1 hs133av2hsug7cdf 1 hs133phsense7cdf 1 hs133phsrefseq7cdf 2 hs95av2hsrefseq7probe 1 hsex10stv2hsensg7probe 1 hsex10stv2hsenst7probe 1 hsfocushsentrezg7cdf 1 hsfocushsug7cdf 1 atgenomeatrefseq7probe 1 cfcanine2cfentrezg7probe 1 cfcanine2cfrefseq7cdf 1 ggchickenggense7cdf 1 hs133aptense7cdf 1 hs133av2hsense7cdf 1 vvgrapevvtigrprobe 1 mm11ksubbmmrefseq7cdf 1 mm430ammug7cdf 1 mm430bmmug7cdf 2 mm430mmentrezg7probe 1 mm74av1mmensg7cdf 1 mm74av2mmensg7cdf 1 osriceostigr 2 rnex10stv1rnensgcdf 1 rnex10stv1rnenst 1 illuminaHumanv2ProbeID.db 2 illuminaRatv1ProbeID.db 2 homolog.db 2 int.geneint.db 3 org.Hs.bf.db 4 org.HsMm.ortholog.db 3 org.Mm.cross.db 2 org.Rn.ipi.db 2 org.Rn.ref.db 4 MeSH.Atu.K84.eg.db 1 MeSH.Hsa.eg.db 20 rnu34 4 rn34arnug 2 rn34arnentrezgcdf 3 rn34arnenst 2 rn34arnenstcdf 2 rn34arnensgprobe 2 rn34arnensg 2 rn230rnug 3 rn230rnrefseqprobe 2 rn230rnrefseq 3 rn230rnenstprobe 3 rn230rnentrezgcdf 3 rn230brnugprobe 3 rn230brnugcdf 3 rn230brnrefseqprobe 2 EnsDb.Mmusculus.v75 47 BSgenome.Hsapiens.UCSC.hg38.masked 144 MeSH.Der.eg.db 17 MeSH.Zma.eg.db 17 MeSH.Ddi.AX4.eg.db 17 MeSH.Dgr.eg.db 18 MeSH.Dpe.eg.db 19 MeSH.Eco.K12.MG1655.eg.db 16 MeSH.Eco.O157.H7.Sakai.eg.db 18 MeSH.Cal.SC5314.eg.db 17 MeSH.Cel.eg.db 19 MeSH.Cja.eg.db 18 MeSH.Osa.eg.db 17 MeSH.Pab.eg.db 17 MeSH.Sco.A32.eg.db 17 MeSH.Spu.eg.db 17 MeSH.Ssc.eg.db 17 MeSH.Mtr.eg.db 16 XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 50 BSgenome.Hsapiens.1000genomes.hs37d5 734 hsfocushsvegaecdf 2 hsfocushsvegag 2 btbovinebtensgprobe 2 zmahomology 3 vvihomology 4 taehomology 3 zebrafish 4 ygs98 4 xenopuslaevis 4 rnex10stv1rnentrezg7probe 1 rn34arnug7probe 1 rn230rnrefseq7cdf 1 rn34arnrefseq7probe 1 rn230rnug7probe 1 rn34arnense7cdf 1 rn34arnrefseq7cdf 1 rn230rnug7cdf 1 rnex10stv1rnrefseq7probe 1 rnex10stv1rnensg7probe 1 rn230brnentrezg7probe 2 rnex10stv1rnenst7probe 1 rn230rnenst7probe 1 rn34arnug7cdf 1 rn230brnense7cdf 1 rn230arnug7cdf 1 rn230arnentrezg7cdf 1 rn230arnense7probe 1 rn230arnenst7probe 2 rn230brnentrezg7cdf 1 rgu34a 4 rgug4130a 4 rgug4105a 4 mm430bmmense7cdf 1 mgug4121a 4 mm430mmrefseq7cdf 1 mm430bmmrefseq7probe 1 mm430mmug7probe 1 ncrhomology 4 mm11ksubammense7cdf 2 hs95av2hsense7probe 1 hsfocusptensg7cdf 1 mgu74c 4 mm74av2mmenst7probe 2 hsfocushsenst7cdf 1 celhomology 4 hsex10stv2hsense7probe 1 dmgenome1dmensg7probe 1 hs133ahsrefseq7cdf 1 osriceosrefseq7cdf 2 hs95av2hsenst7probe 1 hgug4111a 3 hs133av2hsenst7probe 1 mguatlas5k 4 mm11ksubammrefseq7cdf 1 mm11ksubbmmensg7probe 1 mm11ksubammentrezg7cdf 1 hs133aptensg7probe 1 mm430bmmenst7cdf 1 ggchickenggenst7cdf 1 ggchickenggrefseq7cdf 1 mm430mmrefseq7probe 1 hs133ahsentrezg7probe 1 mm11ksubbmmense7cdf 1 dmehomology 3 mgu74bv2 4 mm74bv2mmvegaeprobe 2 dmdrosophila2dmensg 2 mm11ksubbmmvegae 2 hsfocusptensg 2 dmgenome1dmenstprobe 2 hs133bhsensgprobe 3 mm430ammvegagprobe 2 mm74av2mmvegatprobe 2 mm11ksubbmmvegagprobe 2 mm430bmmvegatprobe 1 hs133ahsensg7probe 1 hs133pptenst 3 hs133xhsug 3 btbovinebtenseprobe 2 ath1attaircdf 2 mm11ksubammugcdf 2 hs133xhsvegagprobe 2 mm74cv2mmrefseq 3 btbovinebtugcdf 2 dmgenome1dmugprobe 2 mm430bmmvegat 2 mm11ksubbmmentrezgcdf 2 mmex10stv1mmug7probe 1 drosgenome1 3 hs133av2hsvegae 2 mm11ksubbmmensgprobe 2 hs133xptenstprobe 3 hsfocusptenstprobe 3 dmgenome1dmensgcdf 2 hs133bhsrefseq7probe 1 ggahomology 4 mm74av2mmrefseq 3 dmgenome1dmrefseq 2 mamurhesusmamuug 1 mm430ammvegagcdf 2 mm430ammvegatcdf 2 mm74cv2mmrefseqprobe 2 mm74bv2mmenstprobe 3 mm430mmenstcdf 2 mm430bmmentrezgcdf 2 BSgenome.Hsapiens.UCSC.hg16 2 mm74av2mmenseprobe 3 mm11ksubammensecdf 2 mm11ksubbmmvegag 2 hs133bhsentrezgprobe 2 mm74cv2mmensg 2 hu35ksuba 5 mm74bv2mmentrezg 3 mm430mmentrezgprobe 2 mm430bmmvegag 2 mm430a2mmentrezgcdf 2 mm74av1mmense7probe 2 hs133av2hsug7probe 1 mamurhesusmamuentrezgcdf 1 hs133bhsentrezg7cdf 1 hs133phsensg7cdf 1 hsex10stv2hsensg7cdf 1 mmex10stv1mmensg7cdf 1 ggchickenggentrezgcdf 1 mm74av1mmenst7cdf 1 mm74cv2mmvegagcdf 2 cfcanine2cfvegatcdf 2 mm74bv2mmugcdf 2 mm74av1mmvegaeprobe 2 hs133bhsug7probe 1 hs133pptenstcdf 3 hsfocushsrefseq 3 hs133bptensgprobe 3 mm430bmmvegagcdf 2 mm74av2mmvegaeprobe 2 mm74av1mmvegatcdf 2 hsfocushsensgprobe 2 hsfocusptensgprobe 3 mm74av1mmensg 2 mm430bmmenstprobe 2 mm74av1mmvegaecdf 2 mm430a2mmvegatcdf 1 hsfocushsenseprobe 2 mm430mmvegatprobe 2 mm74av1mmensecdf 3 mm74av1mmensgcdf 2 mm74av1mmenstcdf 3 mm74av1mmrefseqcdf 2 mm74av1mmvegae 2 mm74av2mmenst 3 mm74av2mmenstprobe 3 mm74av2mmentrezgprobe 3 mm74av2mmvegagcdf 2 mm74av2mmvegat 2 mm74av2mmvegag 2 mm74bv2mmrefseqcdf 3 mm74bv2mmvegat 2 mm74cv2mmensgcdf 2 mm74cv2mmensgprobe 2 mm74cv2mmentrezgcdf 2 mm74cv2mmvegae 1 mm74cv2mmvegatprobe 2 osriceosrefseq 3 PartheenMetaData 2 hs133xptentrezgcdf 3 hs25kresogen 3 hs95av2hsentrezgprobe 2 hs95av2hsrefseq 2 hs95av2hsenseprobe 2 hs95av2ptentrezgprobe 3 hsex10stv2hsenseprobe 1 hsex10stv2hsentrezgprobe 1 hsex10stv2hsrefseqcdf 1 hsex10stv2hsug 1 hsex10stv2ptenst 2 hsex10stv2ptentrezg 1 hsex10stv2ptentrezgcdf 1 hsfocushsenstcdf 2 hsfocushsenstprobe 2 hsfocushsrefseqcdf 3 hsfocusptentrezgcdf 2 mgug4120a 4 mm11ksubammenseprobe 3 mm11ksubammensgcdf 2 mm11ksubbmmensecdf 3 mm11ksubbmmensgcdf 2 mm11ksubbmmenst 3 mm11ksubbmmrefseqprobe 2 mm11ksubbmmugcdf 2 mm24kresogen 3 mm430ammensecdf 3 mm430ammenseprobe 2 mm430ammenstcdf 2 mm430ammrefseqcdf 3 mm430ammugprobe 3 mm430bmmense 3 mm430bmmrefseqprobe 3 mm430bmmugprobe 2 mmex10stv1mmense 1 mmex10stv1mmensg 1 mmex10stv1mmenstprobe 1 mmex10stv1mmentrezg 1 mmex10stv1mmentrezgcdf 1 mmex10stv1mmense7probe 1 mmex10stv1mmensg7probe 1 mmex10stv1mmentrezg7probe 1 osriceostigr7cdf 1 atgenomeatrefseq 2 atgenomeatrefseqprobe 2 ath1attairprobe 2 hs133xhsensgcdf 3 MeSH.Eco.B.REL606.eg.db 0 MeSH.Sau.Mu50.eg.db 0 MeSH.Sau.MSSA476.eg.db 0 MeSH.Sau.ED98.eg.db 0 MeSH.Eco.UTI89.eg.db 0 MeSH.Eco.O111.H.11128.eg.db 0 MeSH.Sau.Newman.eg.db 0 MeSH.Sau.M013.eg.db 0 MeSH.Sau.MSHR1132.eg.db 0 MeSH.Sau.VC40.eg.db 0 hs133av2hsugcdf 3 hs133ahsenst 3 hs133bptensecdf 3 rn230arnenstcdf 3 btbovinebtensgcdf 2 btbovinebtug 1 btbovinebtugprobe 2 cfcanine2cfensgprobe 2 cfcanine2cfvegat 2 cfcanine2cfug 2 dmdrosophila2dmensecdf 2 dmdrosophila2dmenseprobe 2 dmdrosophila2dmensgprobe 2 dmdrosophila2dmug 2 dmdrosophila2dmugcdf 2 dmgenome1dmrefseqcdf 2 drzebrafishdrense 3 drzebrafishdrensecdf 2 drzebrafishdrenseprobe 2 ggchickenggensg 2 ggchickenggrefseq 2 drzebrafishdrrefseq 2 drzebrafishdrug 2 drzebrafishdrvegat 2 hs133ahsense 3 hs133ahsensecdf 2 hs133ahsug 3 hs133ahsugcdf 3 hs133ahsvegatcdf 1 hs133aptensg 3 hs133aptenstcdf 2 hs133av2hsenstcdf 2 hs133av2hsrefseqcdf 3 hs133av2hsrefseqprobe 2 hs133av2hsvegag 2 hs133av2hsvegatcdf 2 hs133av2ptensgprobe 3 hs133av2ptenstprobe 2 hs133av2ptentrezgprobe 2 hs133bhsensecdf 2 hs133bhsenstcdf 3 hs133bhsentrezgcdf 3 hs133bhsvegae 2 hs133bhsvegaecdf 2 hs133bhsvegagprobe 2 hs133bhsvegat 2 hs133bptensgcdf 2 hs133bptentrezgprobe 2 hs133phsensg 3 hs133phsensgcdf 2 hs133phsvegaecdf 1 hs133phsvegaeprobe 2 hs133phsvegag 2 hs133phsvegat 2 rn230arnensgprobe 3 rn230arnenst 3 rn230arnenstprobe 2 rn230arnentrezg 3 rn230arnentrezgprobe 2 rn230brnenseprobe 3 rn230brnensgcdf 3 rn230brnensgprobe 3 mmex10stv1mmug 1 mmex10stv1mmugprobe 1 dmdrosophila2dmrefseq7cdf 1 dmgenome1dmenst7cdf 1 hs133xhsensecdf 3 hs133xhsvegatcdf 2 hs133xptrefseqcdf 2 hsfocushsvegae 2 hsfocushsvegagcdf 2 JazaeriMetaData 2 mamurhesusmamuense 2 mamurhesusmamuensg 2 mm11ksubammvegaecdf 1 mm11ksubammvegatprobe 2 mm11ksubbmmvegat 1 mm430a2mmenseprobe 2 mm430a2mmensgcdf 2 mm430a2mmentrezg 2 hs133av2hsentrezg7cdf 1 hs133ahsug7cdf 1 hs133phsensg7probe 1 hs133xptense7cdf 2 hs95av2hsrefseq7cdf 1 hs95av2hsug7cdf 1 hsex10stv2hsrefseq7probe 1 hsex10stv2hsug7probe 2 hsfocushsenst7probe 1 ath1attigr7cdf 1 ggchickenggrefseq7probe 1 ggchickenggug7probe 1 hs133ahsense7cdf 1 hs133ahsenst7probe 1 vvgrapevvtigr 1 mm11ksubammenst7cdf 1 mm11ksubbmmense7probe 1 mm11ksubbmmug7cdf 1 mm11ksubbmmug7probe 1 mm430ammense7probe 1 mm430ammenst7probe 2 mm430bmmense7probe 1 mm430bmmensg7cdf 2 mm430mmenst7cdf 2 mm430mmug7cdf 1 mm74av1mmentrezg7probe 1 mm74av2mmug7cdf 1 rnex10stv1rnensecdf 1 rnex10stv1rnrefseq 2 rnex10stv1rnentrezg 1 rnex10stv1rnrefseqprobe 1 rnex10stv1rnugcdf 2 org.Hs.goa.db 6 illuminaMousev1p1ProbeID.db 2 illuminaMousev2ProbeID.db 1 mamurhesusmamurefseqprobe 1 mamurhesusmamurefseq 1 sc.bacello.db 2 sysptm.db 3 int.did.db 2 int.intact.db 6 org.Hs.pep.db 1 org.Mm.sp.db 4 MeSH.Syn.eg.db 20 MeSH.Aca.eg.db 18 rn34arnrefseq 2 rn34arnentrezgprobe 2 rn34arnenseprobe 2 rn230rnugcdf 2 rn230rnugprobe 2 rn230rnentrezgprobe 3 rn230rnentrezg 3 rn230rnensecdf 2 rn230brnrefseq 3 rn230brnentrezg 3 rn230brnentrezgprobe 2 MeSH.Pae.PAO1.eg.db 18 MafDb.ExAC.r0.3.sites 12 MafDb.ESP6500SI.V2.SSA137 12 MeSH.Dse.eg.db 16 MeSH.Eco.IAI39.eg.db 17 SNPlocs.Hsapiens.dbSNP142.GRCh37 20 MeSH.Cbr.eg.db 18 MeSH.Xla.eg.db 18 MeSH.Dsi.eg.db 17 pd.rta.1.0 58 MeSH.Laf.eg.db 17 MeSH.Mml.eg.db 18 MeSH.Dan.eg.db 16 MeSH.Dda.3937.eg.db 17 MeSH.Dmo.eg.db 16 MeSH.Dre.eg.db 17 MeSH.Eco.ED1a.eg.db 15 MeSH.Dvi.eg.db 18 MeSH.Eco.IAI1.eg.db 11 MeSH.Eco.K12.DH10B.eg.db 11 MeSH.Eco.UMN026.eg.db 17 MeSH.Eqc.eg.db 16 MeSH.Ath.eg.db 17 EnsDb.Rnorvegicus.v79 107 MeSH.Ocu.eg.db 17 MeSH.Pto.eg.db 16 MeSH.Pfa.3D7.eg.db 16 MeSH.Sil.eg.db 16 MeSH.Spo.972h.eg.db 12 MeSH.Tbr.9274.eg.db 18 MeSH.Tgu.eg.db 17 BSgenome.Mfascicularis.NCBI.5.0 57 SNPlocs.Hsapiens.dbSNP144.GRCh38 337 hgug4100a 4 hsfocushsense 2 drzebrafishdrentrezgprobe 2 xtrhomology 3 ScerevisiaeGenome.sacCer1 2 rnex10stv1rnug7cdf 1 rn34arnenst7probe 1 rn230rnrefseq7probe 1 rn230rnentrezg7cdf 2 rn230brnug7probe 1 rnex10stv1rnense7probe 1 rn230rnenst7cdf 2 rn34arnensg7probe 1 rn230brnenst7cdf 1 rn230rnense7cdf 1 rn230arnrefseq7cdf 1 rn230brnrefseq7probe 1 rgu34c 4 rguatlas4k 4 r10kcod 4 rae230b 5 phastCons100way.UCSC.hg38 107 hs133av2hsugprobe 2 mm74cv2mmensecdf 3 hs133ahsenst7cdf 1 mouseLLMappings 3 mm11ksubammense7probe 1 hs133av2ptense7cdf 1 mm74av1mmug7cdf 1 mmuhomology 4 hsfocushsug7probe 1 hsfocushsensg7probe 1 mm430ammrefseq7cdf 1 egohomology 3 mm430bmmentrezg7cdf 1 mm430ammenst7cdf 2 hs133phsenst7cdf 1 hs133xptensg7probe 1 hguDKFZ31 3 hgu95b 4 hs133xhsenst7probe 1 indac 4 dmdrosophila2dmug7probe 1 hs95av2ptense7cdf 1 hsex10stv2hsenst7cdf 1 mm74av2mmense7cdf 2 hs133ahsug7probe 1 hgu95d 3 mm11ksubbmmensg7cdf 1 hsfocushsense7probe 1 CelegansGenome.ce2 1 drzebrafishdrenst7cdf 1 mm430bmmensg7probe 1 ggchickenggensg7cdf 1 dmgenome1dmense7cdf 1 hsfocusptense7probe 1 hs133av2hsenst7cdf 1 mm430bmmug 3 mm430a2mmug 2 mm430ammenst 2 mm74bv2mmenseprobe 2 hgu95c 5 hs133xhsvegatprobe 2 MafDb.ALL.wgs.phase3.release.v5b.20130502 11 mm74cv2mmvegat 2 mm430ammensgprobe 3 org.Hs.ref.db 5 hs133xhsense7cdf 1 dmgenome1dmug7cdf 1 mm74cv2mmvegag 1 mm11ksubammrefseq 2 rn230brnenstcdf 2 hs133aptentrezg 2 hs133ahsvegaeprobe 1 cfcanine2cfentrezgprobe 2 hs133xhsenseprobe 3 mm430bmmvegagprobe 2 mm430mmrefseqcdf 3 mm430mmvegagprobe 1 mm74av2mmensecdf 3 ggchickenggug 2 dmgenome1dmense 2 mm74av1mmugprobe 3 btbovinebtrefseqcdf 2 mm74bv2mmensg 3 hguqiagenv3 4 hs133pptensgprobe 3 mm74bv2mmentrezgcdf 2 hs133phsenseprobe 2 btbovinebtenst 2 cfahomology 4 hs133xhsentrezg7probe 2 mamurhesusmamuenst 2 hsex10stv2hsug7cdf 2 mm11ksubammug 2 mm74cv2mmenst 2 drzebrafishdrenstprobe 2 hs95av2ptenstcdf 2 mm74av2mmvegagprobe 2 mm430mmrefseqprobe 3 mm430a2mmvegae 2 mm430mmugcdf 3 hs133ahsugprobe 3 mm11ksubammentrezgprobe 2 dmdrosophila2dmense 2 drzebrafishdrense7probe 1 mm430mmvegae 2 ggchickenggentrezgprobe 1 mm74bv2mmentrezgprobe 2 hs133av2hsentrezg7probe 1 mm74av1mmenst7probe 1 BSgenome.Drerio.UCSC.danRer10 78 mm430bmmensgprobe 3 hs133phsentrezg7probe 1 hs95av2hsug7probe 1 mm430a2mmenstprobe 1 hs133pptensecdf 3 hs133av2hsvegagcdf 2 dmgenome1dmenst 3 mm11ksubbmmrefseq7probe 1 hs95av2ptrefseqprobe 2 hs133av2hsense7probe 1 hs95av2ptensg 2 mm74bv2mmensgprobe 2 mm430a2mmensg 2 hs133av2ptrefseqcdf 2 hs133av2hsug 3 mm74bv2mmrefseqprobe 2 hs133av2hsenstprobe 2 hsfocusptrefseqprobe 2 hs133pptenseprobe 3 mm430ammentrezg 2 mm74av1mmense 3 mm74av1mmrefseq 3 mm74av1mmvegat 2 mm74av2mmentrezg 3 mm74av2mmrefseqprobe 2 mm74av2mmugcdf 3 mm74bv2mmensgcdf 2 mm74bv2mmug 3 mm74bv2mmugprobe 2 mm74bv2mmvegag 2 mm74cv2mmense 3 mm74cv2mmentrezg 2 mm74cv2mmvegagprobe 2 mwgcod 4 Norway981 3 pedbarrayv10 3 PFAM 3 SHDZ 3 hs133xhsentrezgprobe 2 hs133xptensgprobe 2 hs95av2hsenstcdf 3 hs95av2hsentrezg 2 hs95av2hsrefseqcdf 3 hs95av2hsug 3 hs95av2hsensg 3 hs95av2ptensgcdf 3 hs95av2ptensgprobe 2 hs95av2ptenst 2 hs95av2ptenstprobe 3 hsex10stv2hsensecdf 1 hsex10stv2hsensg 1 hsex10stv2hsensgcdf 1 hsex10stv2hsentrezg 1 hsex10stv2hsentrezgcdf 1 hsex10stv2hsugcdf 1 hsex10stv2ptensgprobe 1 hsex10stv2ptentrezgprobe 1 hsfocushsensecdf 2 hsfocushsugcdf 2 mi16cod 4 mm11ksubammentrezg 2 mm11ksubammrefseqprobe 2 mm11ksubbmmentrezgprobe 2 mm430ammentrezgcdf 2 mm430ammugcdf 3 mm430bmmenseprobe 3 mm430bmmenst 3 mm430mmensgcdf 2 mm430mmensecdf 2 mm430mmenseprobe 2 mm430mmensg 3 mm430mmenstprobe 3 mm430mmentrezgcdf 4 mmex10stv1mmensecdf 1 mmex10stv1mmense7cdf 1 mmex10stv1mmrefseq7cdf 1 mmex10stv1mmrefseq7probe 1 atgenomeattigr 1 atgenomeattigrprobe 1 ath1attigr 1 ath1attigrcdf 1 hs133xhsenstprobe 3 MeSH.Pae.LESB58.eg.db 0 MeSH.Eco.APEC01.eg.db 0 MeSH.Eco.O26.H7.CB9615.eg.db 0 MeSH.Eco.E24377A.eg.db 0 MeSH.Sau.COL.eg.db 0 MeSH.Sau.USA300FPR3757.eg.db 0 MeSH.Bsu.Bsn5.eg.db 0 MeSH.Eco.KO11FL.eg.db 0 MeSH.Eco.O103.H2.12009.eg.db 0 scop.db 2 btbovinebtensg 2 btbovinebtenstprobe 2 btbovinebtrefseqprobe 2 cfcanine2cfense 2 cfcanine2cfensg 2 cfcanine2cfenstprobe 2 cfcanine2cfentrezg 2 cfcanine2cfrefseqcdf 2 cfcanine2cfugcdf 2 cfcanine2cfugprobe 2 dmdrosophila2dmrefseqcdf 2 dmdrosophila2dmrefseqprobe 2 dmgenome1dmensg 2 dmgenome1dmugcdf 2 drzebrafishdrensgprobe 2 ggchickenggensgcdf 2 ggchickenggensgprobe 2 ggchickenggenstcdf 2 ggchickenggentrezg 2 drzebrafishdrugcdf 3 drzebrafishdrugprobe 2 hi16cod 4 hs133ahsenstcdf 2 hs133ahsrefseqcdf 2 hs133aptensgcdf 2 hs133av2hsense 2 hs133av2hsenseprobe 3 hs133av2hsentrezgcdf 2 hs133av2hsvegaeprobe 2 hs133av2ptensg 3 hs133av2ptensgcdf 2 hs133av2ptenst 2 hs133bhsense 3 hs133bhsenseprobe 2 hs133bhsugprobe 2 hs133bptenseprobe 2 hs133bptentrezg 3 hs133phsense 2 hs133phsrefseq 2 hs133phsrefseqprobe 3 hs133phsvegatcdf 2 rn230arnrefseq 2 BSgenome.Dmelanogaster.BDGP.Release5 2 mmex10stv1mmrefseq 1 hs133pptensg 2 hs133pptrefseqcdf 3 hs133xhsvegae 1 hs133xhsvegagcdf 2 hs133xhsvegat 2 hs95av2hsvegagprobe 1 hs95av2hsvegat 2 hs95av2hsvegatcdf 2 hsfocushsvegatcdf 2 mamurhesusmamuensecdf 3 mamurhesusmamuensgcdf 1 mamurhesusmamuensgprobe 1 mm11ksubammvegag 2 mm11ksubammvegatcdf 1 mm430a2mmugcdf 2 mm430a2mmvegaeprobe 2 mm430ammvegaecdf 2 mm430ammvegaeprobe 2 hs133av2hsensg7probe 1 hs133ahsrefseq7probe 1 hs133av2ptensg7probe 1 hs133pptensg7probe 1 hs133xhsug7probe 1 hsex10stv2hsense7cdf 1 hsex10stv2hsrefseq7cdf 1 hsfocushsrefseq7cdf 1 hsfocushsrefseq7probe 1 cfcanine2cfensg7probe 1 cfcanine2cfenst7probe 1 drzebrafishdrug7cdf 1 ggchickenggenst7probe 1 BSgenome.Mmusculus.UCSC.mm7 3 vvgrapevvtigrcdf 1 mm11ksubammensg7cdf 2 mm11ksubbmmenst7probe 1 mm11ksubbmmentrezg7probe 1 mm430mmensg7cdf 2 mm430mmentrezg7cdf 1 mm74av1mmrefseq7probe 2 mm74av2mmenst7cdf 1 HsapiensGenome.hg16 1 osriceostigrcdf 2 rnex10stv1rnenstcdf 2 rnex10stv1rnenstprobe 1 rnex10stv1rnentrezgprobe 1 rnex10stv1rnug 1 sc.dbsubloc.db 4 dName.db 3 int.mppi.db 2 hcgi12k 1 rn34arnrefseqprobe 2 rn34arnentrezg 2 rn34arnense 3 rn230rnrefseqcdf 3 rn230rnenstcdf 3 rn230rnensgcdf 2 rn230rnensg 3 rn230rnenseprobe 2 rn230rnense 2 rn230brnug 3 rn230brnentrezgcdf 2 BSgenome.Hsapiens.UCSC.hg38 3912 EnsDb.Rnorvegicus.v75 34 MafDb.ALL.wgs.phase3.release.v5a.20130502 11 LowMACAAnnotation 28 MeSH.Dme.eg.db 18 MeSH.Eco.CFT073.eg.db 12 BSgenome.Btaurus.UCSC.bosTau8 33 EnsDb.Hsapiens.v79 271 MeSH.Mdo.eg.db 17 MeSH.Miy.eg.db 17 MeSH.Eco.HS.eg.db 11 MeSH.Dya.eg.db 16 MeSH.Eco.O157.H7.EDL933.eg.db 11 MeSH.Eco.S88.eg.db 11 MeSH.Ame.eg.db 19 MeSH.Ani.FGSC.eg.db 17 MeSH.Bfl.eg.db 17 MeSH.Bsu.TUB10.eg.db 11 MeSH.Cfa.eg.db 17 MeSH.Cre.eg.db 16 MeSH.Oan.eg.db 17 MeSH.Oni.eg.db 16 MeSH.Sce.S288c.eg.db 17 MeSH.Tgo.ME49.eg.db 16 MeSH.Mmu.eg.db 19 TxDb.Athaliana.BioMart.plantsmart25 27 phastCons7way.UCSC.hg38 48 SNPlocs.Hsapiens.dbSNP144.GRCh37 703 hsfocusptenst 3 rn230arnensgcdf 2 hsfocusptenstcdf 3 hsfocushsensg 3 spohomology 4 vvgrapevvtigr7cdf 1 rn34arnentrezg7probe 1 rnex10stv1rnug7probe 1 rnex10stv1rnrefseq7cdf 1 rnex10stv1rnensg7cdf 1 rn230rnense7probe 1 rn230arnug7probe 1 rn230arnenst7cdf 1 rn34arnentrezg7cdf 1 rn230brnrefseq7cdf 1 rn34arnensg7cdf 2 rn230brnug7cdf 1 rn230arnentrezg7probe 1 rn230arnensg7probe 1 rn230brnensg7cdf 1 prt440acdf 2 prt440scdf 1 mgrhomology 3 hcg110 4 mm74av2mmentrezg7cdf 1 hs95av2ptense7probe 1 mm74av1mmentrezg7cdf 1 mgu74a 5 mm11ksubammug7probe 1 hs133av2ptense7probe 1 mm430mmensg7probe 2 hu35ksubd 4 pfahomology 3 mm430bmmug7probe 1 drzebrafishdrug7probe 1 hs95av2hsense7cdf 2 hs95av2hsensg7probe 1 ath1attigr7probe 1 mu19ksuba 4 h10kcod 3 mm430ammensg7cdf 1 cfcanine2cfug7probe 1 hs133ahsense7probe 1 hsfocusptensg7probe 1 mm74av1mmensg7probe 1 hgubeta7 3 mu11ksubb 4 mgu74cv2 4 hs133xhsensg7cdf 2 mm430mmense7probe 1 cfcanine2cfense7probe 1 hgug4110b 4 mm430ammensg7probe 1 hs133aptrefseq 2 mm74av2mmrefseq7probe 1 HsapiensGenome.hg18 2 mu19ksubc 4 hs133aptensg7cdf 1 mmex10stv1mmug7cdf 2 mm74bv2mmvegagprobe 2 org.Mm.ref.db 2 mm430mmenst 3 mm430mmentrezg 3 mm11ksubammensg 1 mm430a2mmvegagprobe 2 mm430ammvegag 2 mm74bv2mmensecdf 2 mm430mmensgprobe 2 dmgenome1dmug 2 hs133pptentrezg 2 mm430bmmensg 2 btbovinebtensecdf 2 hs133aptenst 2 mm430a2mmensgprobe 1 hs133av2hsrefseq 2 mm74av2mmensg 3 hs95av2ptrefseq 2 mm430bmmvegaeprobe 2 mm11ksubammvegat 1 hs133phsentrezgprobe 2 btbovinebtrefseq 2 hs133av2ptentrezg 3 hs95av2hsvegaeprobe 2 drzebrafishdrentrezgcdf 2 mm430bmmentrezg 3 mm430ammensg 3 mm430bmmentrezgprobe 2 hs133av2ptenseprobe 3 mm11ksubbmmvegatprobe 2 ggchickenggugprobe 2 mm74cv2mmvegatcdf 2 hs133xhsentrezg7cdf 1 hsfocushsentrezg7probe 1 mm430mmug 3 mm74bv2mmvegatprobe 1 hs133av2hsvegatprobe 2 mm11ksubammentrezg7probe 1 mm11ksubammense 2 omyhomology 4 ggchickenggrefseqprobe 2 hs95av2ptensecdf 3 mm430bmmvegatcdf 2 mm11ksubbmmenseprobe 2 cfcanine2cfrefseq7probe 1 mm430a2mmrefseqcdf 1 mm74av2mmense 3 hgug4101a 4 hgug4112a 4 mm430ammense 3 mgu74b 5 mm430mmugprobe 3 osahomology 4 mm74av2mmug7probe 1 cfcanine2cfentrezg7cdf 1 hsex10stv2ptense7probe 1 mm430ammensgcdf 2 cfcanine2cfenseprobe 2 dmdrosophila2dmensg7cdf 1 mm11ksubbmmensg 3 BSgenome.Tguttata.UCSC.taeGut2 27 mm430a2mmentrezgprobe 2 drzebrafishdrrefseqprobe 2 mm430mmvegaecdf 2 ggchickenggrefseqcdf 2 drzebrafishdrensg 3 dmdrosophila2dmensgcdf 2 mm74cv2mmenstcdf 2 atgenomeatrefseq7cdf 1 hs133aptenseprobe 3 hs133aptrefseqprobe 1 mm430bmmvegae 2 hs133phsvegatprobe 2 hs133av2hsensgprobe 2 cfcanine2cfensecdf 3 mm430a2mmvegat 2 hs133av2hsvegaecdf 2 mm430mmvegaeprobe 2 mm430mmvegag 2 mm74av1mmenseprobe 3 mm74av1mmenst 2 mm74av1mmvegagcdf 2 mm74av1mmvegagprobe 2 mm74av1mmvegatprobe 2 mm74av2mmrefseqcdf 3 mm74av2mmvegae 2 mm74av2mmvegatcdf 2 mm74bv2mmvegae 2 mm74cv2mmrefseqcdf 2 mm74cv2mmug 2 mm74cv2mmenstprobe 2 mm74cv2mmentrezgprobe 2 mm74cv2mmvegaecdf 1 mm74cv2mmvegaeprobe 2 mu11ksuba 4 Mu15v1 3 Mu22v3 2 osriceosrefseqcdf 2 hs133xhsugprobe 2 hs133xptenseprobe 3 hs133xptensg 3 hs133xhsrefseq 2 hs133xhsrefseqprobe 2 hs133xhsugcdf 2 hs133xptensgcdf 3 hs133xptenst 3 hs133xptenstcdf 3 hs133xptentrezg 3 hs95av2hsenst 2 hs95av2hsenstprobe 2 hs95av2hsugcdf 3 hs95av2hsugprobe 2 hs95av2ptenseprobe 3 hsex10stv2hsensgprobe 1 hsex10stv2hsenst 2 hsex10stv2hsenstcdf 2 hsex10stv2hsugprobe 2 hsex10stv2ptenseprobe 2 hsfocushsensgcdf 2 hsfocushsentrezgprobe 2 hsfocushsugprobe 2 hsfocusptensgcdf 2 hsfocusptentrezgprobe 2 mm11ksubammenst 2 mm11ksubammenstprobe 3 mm11ksubbmmense 2 mm11ksubbmmentrezg 2 mm11ksubbmmenstprobe 3 mm11ksubbmmrefseq 3 mm11ksubbmmugprobe 2 mm430ammentrezgprobe 2 mm430ammug 3 mm430bmmrefseq 3 mm430mmrefseq 3 mmex10stv1mmenseprobe 1 mmex10stv1mmensgcdf 1 mmex10stv1mmensgprobe 1 mmex10stv1mmenstcdf 1 mmex10stv1mmenst7probe 1 atgenomeatrefseqcdf 2 atgenomeattairprobe 2 atgenomeattigrcdf 1 ath1attigrprobe 1 hs133xhsensg 3 hs133xhsensgprobe 2 hs133xhsenst 3 hs133xhsenstcdf 3 hs133xhsentrezg 3 hs133xhsentrezgcdf 3 ath1atrefseq7probe 1 MeSH.Eco.O157.H7.TW14359.eg.db 0 MeSH.Sau.Mu3.eg.db 0 MeSH.Bsu.W23.eg.db 0 MeSH.Bsu.RONN1.eg.db 0 MeSH.Eco.SMS35.eg.db 0 MeSH.Eco.SE11.eg.db 0 MeSH.Eco.O26.H11.11368.eg.db 0 MeSH.Sau.MW2.eg.db 0 btbovinebtentrezgcdf 2 cfcanine2cfensgcdf 2 cfcanine2cfenst 2 cfcanine2cfenstcdf 2 cfcanine2cfentrezgcdf 2 chicken 2 dmdrosophila2dmenstcdf 2 dmdrosophila2dmenstprobe 2 dmgenome1dmensecdf 3 dmgenome1dmenstcdf 2 drzebrafishdrenst 2 drzebrafishdrenstcdf 2 ggchickenggenseprobe 2 ggchickenggenst 2 drzebrafishdrvegatcdf 2 drzebrafishdrvegatprobe 1 hs133ahsensg 3 hs133ahsenstprobe 2 hs133ahsrefseq 2 hs133ahsvegae 2 hs133ahsvegag 2 hs133ahsvegagcdf 2 hs133ahsvegatprobe 2 hs133aptense 3 hs133aptensecdf 2 hs133aptentrezgcdf 2 hs133av2hsensecdf 3 hs133av2hsensgcdf 2 hs133av2ptensecdf 2 hs133av2ptenstcdf 2 hs133bhsenstprobe 3 hs133bhsvegaeprobe 2 hs133bhsvegag 2 hs133bhsvegagcdf 2 hs133bhsvegatcdf 2 hs133bhsvegatprobe 1 hs133bptense 3 hs133bptensg 3 hs133bptenst 2 hs133bptenstcdf 3 hs133bptentrezgcdf 3 hs133bptrefseqcdf 2 hs133phsensecdf 2 hs133phsenstcdf 2 hs133phsrefseqcdf 3 hs133phsugprobe 3 hs133phsvegagcdf 2 hs133phsvegagprobe 2 rn230arnense 3 rn230arnenseprobe 3 rn230arnentrezgcdf 3 rn230arnug 3 rn230arnugcdf 2 rn230brnensecdf 3 rn230brnensg 3 mmex10stv1mmrefseqcdf 1 mmex10stv1mmrefseqprobe 1 mmex10stv1mmugcdf 1 dmdrosophila2dmrefseq7probe 1 DmelanogasterGenome.dm2 1 drzebrafishdrensg7probe 1 hs133pptentrezgcdf 3 hs133pptrefseqprobe 1 hs95av2hsvegae 2 hs95av2hsvegag 2 hs95av2hsvegagcdf 2 hs95av2hsvegatprobe 2 hs95av2ptrefseqcdf 2 hsfocusptrefseqcdf 2 HuO22 3 mamurhesusmamuenstcdf 2 mamurhesusmamuenstprobe 2 mamurhesusmamuentrezg 1 mamurhesusmamuentrezgprobe 1 mm11ksubbmmvegaeprobe 1 mm430a2mmense 1 mm430a2mmvegag 2 mm430ammvegat 2 mm430ammvegatprobe 2 hs133bhsensg7cdf 1 hs133bhsensg7probe 1 hs133bhsenst7probe 2 hs133bhsug7cdf 1 hs133bptense7cdf 2 hs133xhsrefseq7cdf 1 hsex10stv2ptense7cdf 1 hsfocushsense7cdf 1 ath1atrefseq7cdf 1 drzebrafishdrrefseq7probe 1 ggchickenggense7probe 1 ggchickenggug7cdf 1 hs133ahsensg7cdf 1 mm11ksubbmmenst7cdf 1 mm430ammentrezg7probe 1 mm430bmmentrezg7probe 1 mm430mmenst7probe 1 mm74av1mmrefseq7cdf 1 mm74av2mmentrezg7probe 1 osriceostigrprobe 2 rnex10stv1rnensg 2 rnex10stv1rnense 2 rnex10stv1rnensgprobe 2 rnex10stv1rnentrezgcdf 1 rnex10stv1rnrefseqcdf 2 greengenes13.5MgDb 7 mm430a2mmenst 1 mm430a2mmenstcdf 1 mamurhesusmamurefseqcdf 1 rnex10stv1rnenseprobe 1 rnex10stv1rnugprobe 1 illuminaHumanv1ProbeID.db 2 illuminaMousev1ProbeID.db 1 int.domine.db 4 org.Mm.ipi.db 2 org.Rn.cross.db 2 IlluminaHumanMethylationEPICanno.ilm10b2.hg19 267 TxDb.Ggallus.UCSC.galGal4.refGene 26 BSgenome.Vvinifera.URGI.IGGP8X 27 TxDb.Sscrofa.UCSC.susScr3.refGene 27 rta10transcriptcluster.db 25 hta20probeset.db 31 clariomdhumantranscriptcluster.db 50 clariomshumantranscriptcluster.db 39 MafDb.ESP6500SI.V2.SSA137.hs37d5 7 pd.clariom.s.mouse 46 pd.clariom.d.human 72 pd.clariom.s.human 84 pd.clariom.s.human.ht 31 IlluminaHumanMethylationEPICmanifest 1126 miRBaseVersions.db 168 MafDb.1Kgenomes.phase1.hs37d5 138 TxDb.Drerio.UCSC.danRer10.refGene 59 MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 2 TxDb.Btaurus.UCSC.bosTau8.refGene 29 TxDb.Mmulatta.UCSC.rheMac3.refGene 25 mta10probeset.db 31 clariomsmousehttranscriptcluster.db 27 clariomsmousetranscriptcluster.db 31 clariomsrattranscriptcluster.db 26 rta10probeset.db 25 pd.clariom.s.rat 26 lumiMouseIDMapping.db 1 LymphoSeqDB 121 MafDb.ExAC.r0.3.1.snvs.hs37d5 3 TxDb.Celegans.UCSC.ce11.refGene 45 TxDb.Dmelanogaster.UCSC.dm6.ensGene 188 alternativeSplicingEvents.hg19 27 fitCons.UCSC.hg19 27 BSgenome.Ggallus.UCSC.galGal5 28 TxDb.Mmulatta.UCSC.rheMac8.refGene 27 hta20transcriptcluster.db 61 clariomshumanhttranscriptcluster.db 28 pd.clariom.s.rat.ht 24 FlowSorted.CordBloodNorway.450k 1 MafDb.1Kgenomes.phase3.hs37d5 61 BSgenome.Celegans.UCSC.ce11 108 TxDb.Cfamiliaris.UCSC.canFam3.refGene 28 TxDb.Ptroglodytes.UCSC.panTro4.refGene 24 TxDb.Rnorvegicus.UCSC.rn6.refGene 97 BSgenome.Mmulatta.UCSC.rheMac8 47 IlluminaHumanMethylation27kanno.ilmn12.hg19 48 mta10transcriptcluster.db 27 MafDb.ESP6500SI.V2.SSA137.GRCh38 7 BSgenome.Ptroglodytes.UCSC.panTro5 29 clariomdhumanprobeset.db 62 clariomsrathttranscriptcluster.db 24 pd.clariom.s.mouse.ht 26 EnsDb.Hsapiens.v86 2852 MafDb.gnomAD.r2.0.1.hs37d5 6 MafDb.gnomADex.r2.0.1.hs37d5 5 IlluminaHumanMethylationEPICanno.ilm10b4.hg19 1179 AHEnsDbs 48 alternativeSplicingEvents.hg38 27 SNPlocs.Hsapiens.dbSNP149.GRCh38 61 MafDb.ExAC.r1.0.hs37d5 42 MafDb.ExAC.r1.0.nonTCGA.hs37d5 27 IlluminaHumanMethylationEPICanno.ilm10b3.hg19 37 AHCytoBands 22 TxDb.Ggallus.UCSC.galGal5.refGene 40 MafDb.TOPMed.freeze5.hg38 30 GenomeInfoDbData 56747 SNPlocs.Hsapiens.dbSNP150.GRCh38 68 JASPAR2018 255 geneplast.data.string.v91 35 LRBase.Ath.eg.db 5 LRBase.Bta.eg.db 5 BSgenome.Carietinum.NCBI.v1 26 LRBase.Mmu.eg.db 4 LRBase.Rno.eg.db 5 LRBase.Dre.eg.db 5 LRBase.Cel.eg.db 4 org.hs.eg.db 2 MafDb.ExAC.r1.0.nonTCGA.GRCh38 28 MafDb.gnomAD.r2.0.1.GRCh38 5 MafDb.1Kgenomes.phase3.GRCh38 47 BSgenome.Sscrofa.UCSC.susScr11 48 SNPlocs.Hsapiens.dbSNP151.GRCh38 11 LRBase.Hsa.eg.db 5 BSgenome.Aofficinalis.NCBI.V1 25 MafDb.gnomADex.r2.1.hs37d5 46 LRBase.Gga.eg.db 5 LRBase.Dme.eg.db 5 LRBase.Ssc.eg.db 5 LRBase.Pab.eg.db 5 TxDb.Ptroglodytes.UCSC.panTro5.refGene 21 TxDb.Sscrofa.UCSC.susScr11.refGene 32 MafDb.gnomADex.r2.0.1.GRCh38 4 MafDb.1Kgenomes.phase1.GRCh38 29 MafDb.TOPMed.freeze5.hg19 27 BSgenome.Ptroglodytes.UCSC.panTro6 27 MafDb.gnomAD.r2.1.hs37d5 32 LRBase.Xtr.eg.db 4 silva128.1MgDb 5 ribosomaldatabaseproject11.5MgDb 4 MafDb.ExAC.r1.0.GRCh38 49 EuPathDB 25 hpAnnot 23 MafDb.gnomAD.r2.1.GRCh38 62 org.Mxanthus.db 33 MafDb.gnomAD.r3.0.GRCh38 5 ENCODExplorerData 29 TxDb.Drerio.UCSC.danRer11.refGene 38 TxDb.Mmulatta.UCSC.rheMac10.refGene 73 TxDb.Ptroglodytes.UCSC.panTro6.refGene 22 GenomicState 73 BSgenome.Mmulatta.UCSC.rheMac10 90 rat2302frmavecs 24 BSgenome.Btaurus.UCSC.bosTau9 37 go.db 1 TxDb.Celegans.UCSC.ce11.ensGene 88 BSgenome.Mdomestica.UCSC.monDom5 23 BSgenome.Cjacchus.UCSC.calJac3 25 MafDb.gnomADex.r2.1.GRCh38 25 TxDb.Ggallus.UCSC.galGal6.refGene 27 TxDb.Btaurus.UCSC.bosTau9.refGene 29 BSgenome.Drerio.UCSC.danRer11 72 BSgenome.Ggallus.UCSC.galGal6 39 coMET 0 phastCons30way.UCSC.hg38 20 BSgenome.Dvirilis.Ensembl.dvircaf1 21 EpiTxDb.Sc.sacCer3 21 vcfR 1 limma 16 annotate 2 biovizBase 1 datasets 1 DESeq 0 DESeq2 7 gdsfmt 1 grid 1 BSgenome.Ppaniscus.UCSC.panPan1 23 TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq 20 BSgenome.Ppaniscus.UCSC.panPan2 27 DEXICA 0 BiocWorkflowTools 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vsn 1 AnnotationHub 3 BiocGenerics 9 BiocInstaller 1 Biostrings 12 DNAcopy 1 edgeR 8 ensembldb 4 gage 0 graph 1 graphics 1 MeSH.Eca.eg.db 3 BANDITS 0 CluMSID 0 waddR 0 pathview 1 rtracklayer 3 XVector 3 AHPathbankDbs 24 AHPubMedDbs 26 gwascatData 19 hthgu133pluspm.db 29 hthgu133plusb.db 19 BSgenome.Rnorvegicus.UCSC.rn7 82 TxDb.Rnorvegicus.UCSC.rn7.refGene 74 scAnnotatR.models 18 kegg.db 1 TxDb.Hsapiens.UCSC.hg38.refGene 94 htmg430b.db 19 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor 30 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major 29 CTCF 30 karyoploteR 0 synaptome.db 32 KaryoploteR 0 GeneSummary 32 ontoProcData 20 synaptome.data 29 u 0 MafH5.gnomAD.v3.1.1.GRCh38 5 AHLRBaseDbs 26 hthgu133plusa.db 20 htratfocus.db 19 TxDb.Athaliana.BioMart.plantsmart51 34 rGenomeTracksData 33 TxDb.Cfamiliaris.UCSC.canFam5.refGene 18 p 0 AHMeSHDbs 28 AHWikipathwaysDbs 22 htmg430pm.db 22 htmg430a.db 20 htrat230pm.db 19 Orthology.eg.db 154 chromhmmData 42 BSgenome.Mmusculus.UCSC.mm39 199 excluderanges 42 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rvest 171 readxl 39 ggplot2 323 dplyr 98 vctrs 114 sass 294 DBI 333 Rcpp 364 tinytex 384 shiny 308 generics 16 renv 118 cluster 84 modelr 19 paws.compute 101 ggfun 71 patchwork 96 bdsmatrix 13 reldist 8 RcppEigen 161 Rtsne 28 fitdistrplus 35 ica 4 igraph 184 gargle 29 lintr 117 rex 2 testthat 296 fields 11 maps 13 spatstat.core 9 spatstat.sparse 31 quantreg 87 ape 66 cachem 342 iterators 7 locfit 105 nnet 37 foreign 59 data.table 386 babelgene 7 benchmarkme 1 processx 301 ps 350 dbscan 7 magick 24 optparse 48 snow 8 RcppHNSW 27 pdist 1 ragg 247 xgboost 118 shinyFiles 11 spatial 26 RCurl 183 magrittr 10 digest 433 commonmark 256 pRolocdata 10 NMF 16 WGCNA 16 RcppZiggurat 6 R.filesets 8 aroma.core 8 admisc 8 rsvd 8 GWASExactHW 7 ade4 4 segmented 31 utf8 96 dichromat 5 dendextend 54 purrr 88 vegan 45 org.mm.eg.db 1 DelayedArray 5 filelock 50 shinyhelper 6 genefu 0 TSP 14 ellipsis 5 BSgenome.Hsapiens.UCSC.hg1 0 flowWorkspaceData 1 minqa 94 robustbase 37 gower 19 e1071 103 inum 2 libcoin 3 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