\name{enrichKEGG} \alias{enrichKEGG} \title{KEGG Enrichment Analysis of a gene set.} \usage{enrichKEGG(gene, organism="human", pvalueCutoff=0.05, readable=FALSE)} \description{KEGG Enrichment Analysis of a gene set. Given a vector of genes, this function will return the enrichment KEGG categories with FDR control.} \value{A \code{enrichKEGGResult} instance.} \author{Guangchuang Yu \url{http://ygc.name}} \seealso{\code{\link{enrichKEGGResult-class}}, \code{\link{compareCluster}}} \keyword{manip} \arguments{\item{gene}{a vector of entrez gene id.} \item{organism}{Currently, only "human" and "mouse" supported.} \item{pvalueCutoff}{Cutoff value of pvalue.} \item{readable}{if readable is TRUE, the gene IDs will mapping to gene symbols.}} \examples{data(gcSample) yy = enrichKEGG(gcSample[[5]], pvalueCutoff=0.01) head(summary(yy)) #plot(yy)}