Version 1.1.6
________________________________________________________________________________
* Added documentation

Version 1.1.5
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* Now computes mzR compatible acquisitionNum for the scans (thanks to Sebastian
  Gibb)
* Checks for existence of local files (thanks to Sebastian Gibb)
* XML moved from depend to import

Version 1.1.4
--------------------------------------------------------------------------------
* Now computes mzR compatible acquisitionNum for the scans (thanks to Sebastion
  Gibb)
* Various bug fixes

Version 1.1.3
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* Introducing the mzIDCollection class to handle multiple mzID objects

Version 1.1.2
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* Added the possibility to create the different 'sub'classes of mzID directly
  from a file without first having an internal xml representation and namespace

Version 1.1.1
--------------------------------------------------------------------------------
* Fixed bug where multiple names in the modification rules would crash the
  parsing. Multiple names gets collapsed with '/'

Version 1.0.0
--------------------------------------------------------------------------------
* Accepted in Bioconductor

Version 0.99.3
--------------------------------------------------------------------------------
* Fix for issue #6. It now correctly parses files with empty AnalysisData
  nodes as empty mzID objects.
* Full support for mzIdentML v1.0 and v1.1 

Version 0.99.2
--------------------------------------------------------------------------------
* Accepted in Bio 2.13

Version 0.9.1
--------------------------------------------------------------------------------
* Added unit test using testthat for low level functions
* Added BiocViews DataImport, MassSpectrometry, Proteomics

Version 0.9.0
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* Submitted to Bioconductor

Version 0.3.1
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* Comment unused functions <2013-07-05 Fri>
* Minor typos in vignette  <2013-07-05 Fri>

Version 0.3.0
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NEW FEATURES AND FUNCTIONS
* Support for mzIdentML v1.0 (thanks Laurent Gatto)

Version 0.2.1
--------------------------------------------------------------------------------

NEW FEATURES AND FUNCTIONS
* Version counter now in BioConductor style
* Namespace now extracted from file instead of hardcoded in the constructor
* mzID constructor now checks the mzIdentML version before parsing (only 1.1.0
  supported atm)


Version 0.1-1
--------------------------------------------------------------------------------

NEW FEATURES AND FUNCTIONS
* Added function `flatten` to create tabular representation of results

Version 0.0-2
--------------------------------------------------------------------------------

NEW FEATURES AND FUNCTIONS
* The package is now fully documented
* created helper functions: `countChildren`, `attrExtract` and
  `attrExtractNameValuePair`
* Added NEWS file
* Added README.md file
* The parser now succesfully imports all test files on the HUPO mzIdentML page

PERFORMANCE
* Improvements in the mzIDpsm constructor makes it ~2-3x faster depending on the
  file size (thanks to `countChildren`, `attrExtract` and
  `attrExtractNameValuePair`)

Version 0.0-1
--------------------------------------------------------------------------------

NEW FEATURES AND FUNCTIONS
* First build of the package
* Introduction of the classes: `mzID`, `mzIDdatabase`, `mzIDevidence`,
  `mzIDparameters`, `mzIDpeptides` and `mzIDpsm` with related constructors