Changes in version 1.4.1:

    o   BUG ANNMAP-118 transcriptToCodingRange( ..., end='3' ) returns
	whole transcript for untranslated transcripts.

Changes in version 1.2.1:

    o   BUG ANNMAP-112 transcriptCoordsToGenome and proteinCoordsToGenome
	both failed when returning a GRanges object as I had strand as a
	numeric, rather than an integer.

Changes in version 1.1.1:

    o   IMPROVED genomicPlot when passed a .genes data.frame used to call
	geneDetails on it to ensure the data was in the correct format.
	This has been removed, so that you can pass custom regions in and
	have them plotted on the graph.

Changes in version 0.99.3:

    o   BUG ANNMAP-110 XXXInRange( NULL ) used to throw an error.  It now
	returns NULL.

    o   BUG ANNMAP-111 Fix crash when translation data is incorrect and
	causes us to fall off the translation exon when finding the
	UTR/Coding range.

Changes in version 0.99.2:

    o   BUG ANNMAP-109 geneToSymbol when passed a vector of gene IDs,
	returned the symbols in the order of the genes start location
	rather than the order the function was called with.

Changes in version 0.99.1:

    o   BUG ANNMAP-101 ngsBridgePlot called with no genes in range had a
	huge border.

    o   BUG ANNMAP-106 Empty ngsBridgePlot trace should draw line at 0.

    o   BUG ANNMAP-107 transcriptToCodingRange was very slow.

Changes in version 0.99.0:

    o   NEW Initial Release to Bioconductor

    o   BUG ANNMAP-98 A call to transcriptToTranslatedprobes for
	transcripts in HPRT1 caused a crash

Changes in version 0.9.16:

    o   BUG ANNMAP-97 geneToExonProbeset threw an error when as.vector=TRUE

Changes in version 0.9.15:

    o   NEW ANNMAP-94 Added annmapAddConnection method for setting up
	databases.

Changes in version 0.9.14:

    o   NEW ANNMAP-90 Added generateBridgeData method for helping with BAM
	file imports.

    o   IMPROVED ANNMAP-93 Refactored out some NCBI->Ensembl seqname
	mapping functions.

    o   IMPROVED ANNMAP-84 Added ngsBridgePlot examples to the cookbook.

Changes in version 0.9.13:

    o   IMPROVED ANNMAP-78 Cookbook now appears when vignette(
	package='annmap' ) is called.

Changes in version 0.9.12:

    o   IMPROVED ANNMAP-74, ANNMAP-75, ANNMAP-76; Fixed warnings and notes
	when using R-2.15

Changes in version 0.9.11:

    o   IMPROVED ANNMAP-73 Methods generalisedNameToNCBI,
	generalisedNameToEnsembl, seqnameMapping, seqnamesToNCBI and
	seqnamesToEnsembl added to allow easy renaming of the seqnames
	column of GRanges data.

Changes in version 0.9.10:

    o   IMPROVED ANNMAP-71 Bug in geneToSymbol fixed

Changes in version 0.9.9:

    o   IMPROVED ANNMAP-63 We now use GenomicRanges instead of IRanges

Changes in version 0.9.8:

    o   IMPROVED ANNMAP-58 Added 4 pos translation documentation to
	cookbook

    o   BUG ANNMAP-60 Webservice tests were failing

    o   BUG ANNMAP-54 geneToExonProbeset didn't support as.vector

Changes in version 0.9.7:

    o   BUG ANNMAP-48 Error in proteinCoordsToGenome in annmap

    o   BUG ANNMAP-47 annmapGenePlot fails to show individual transcripts

    o   IMPROVED ANNMAP-45 Added a NEWS.Rd file to inst

Changes in version 0.9.6:

    o   BUG Fixed ANNMAP-44; genomicPlot crashes when called with very
	small overlapped areas

Changes in version 0.9.5:

    o   IMPROVED ANNMAP-41; All InRange methods are now S3 methods which
	work with character, data.frame or RangedData (see ?annmap.range).

    o   IMPROVED ANNMAP-42; genomicPlot highlights 'colour' column is now
	'col' as with all other methods.

    o   BUG ANNMAP-40; genomicPlot crashes if highlights data.frame has
	unexpected columns.