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GPU-enabled build/check report for BioC 3.21
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This page was generated on 2025-04-06 12:35 -0400 (Sun, 06 Apr 2025).

More about biocgpu


Hostname: biocgpu
OS: Linux (Ubuntu 24.04.2 LTS)
Arch: x86_64
Platform: x86_64-linux-gnu
R version: R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences"
R environment variables: Renviron.bioc

C compiler

R variable (VAR)Value ('R CMD config <VAR>' output)
CCgcc -std=gnu2x
CFLAGS-g -O2 -Wall -Werror=format-security
CPICFLAGS-fpic
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('gcc -std=gnu2x --version' output):

gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.


C++ compiler

R variable (VAR)Value ('R CMD config <VAR>' output)
CXXg++ -std=gnu++17
CXXFLAGS-g -O2 -Wall -Werror=format-security
CXXPICFLAGS-fpic
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ -std=gnu++17 --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.


C++11 compiler

R variable (VAR)Value ('R CMD config <VAR>' output)
CXX11g++
CXX11FLAGS-g -O2 -Wall -Werror=format-security
CXX11PICFLAGS-fpic
CXX11STD-std=gnu++11
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.


C++14 compiler

R variable (VAR)Value ('R CMD config <VAR>' output)
CXX14g++
CXX14FLAGS-g -O2 -Wall -Werror=format-security
CXX14PICFLAGS-fpic
CXX14STD-std=gnu++14
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.


C++17 compiler

R variable (VAR)Value ('R CMD config <VAR>' output)
CXX17g++
CXX17FLAGS-g -O2 -Wall -Werror=format-security
CXX17PICFLAGS-fpic
CXX17STD-std=gnu++17
Please refer to 'R CMD config -h' for the meaning of these variables

Compiler version ('g++ --version' output):

g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
Copyright (C) 2023 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.


Java

java version ('java --version' output):

openjdk 21.0.6 2025-01-21
OpenJDK Runtime Environment (build 21.0.6+7-Ubuntu-124.04.1)
OpenJDK 64-Bit Server VM (build 21.0.6+7-Ubuntu-124.04.1, mixed mode, sharing)

Pandoc

pandoc version ('pandoc --version' output):

pandoc 3.1.3
Features: -server +lua
Scripting engine: Lua 5.4
User data directory: /home/biocbuild/.local/share/pandoc
Copyright (C) 2006-2023 John MacFarlane. Web: https://pandoc.org
This is free software; see the source for copying conditions. There is no
warranty, not even for merchantability or fitness for a particular purpose.

More information might be added in the future...